Prunus mume (Japanese apricot): 103326991
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Entry
103326991 CDS
T03196
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103326991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103326991
Spliceosome [BR:
pmum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
103326991
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
103326991
NCBI-ProteinID:
XP_008227481
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Position
LG3:20786851..20792307
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AA seq
567 aa
AA seq
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MNRKMEHEDDARVNAEGFESDPKRQKRNGHSSPSSSPPPPAFEGSLLPGFNYGDEDDEDN
QRRPPVDGYRGDGGDNQRDIKSGVEVEEEEEEEDDDDDDDLEQGLYRRSREIEVRRDCPY
LDAVNRQVLDFDFEKFCSLSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINL
RTEKVYCLPDGYEISDPSLDDIRHVLNPRFTEEQVEQIDKNKQWSRALDGSDYLPGMVGL
NNIKETDFVNVTIQSLMRVTPLRNFFLIPKNYQHCKSPLVHRFGELTRKIWHARNFKGQV
SPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRTSKKDSSIIYECFQGELEV
VKEIPKKGIEKKENGDDQNTDVVTENNGIVKERYKMPFLMLGLDLPPPPLFKDVMEKNII
PQVPLFNILKKFDGDTVTEVVRPRIARMRYRVTRLPQYLILHMQRFTKNNFFVEKNPTLV
NFPVKNLELKDYIPLSTPKENERMRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEM
QDLHVSETLPQMVALSETYMQIYEQQQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtaagatggaacatgaagatgatgctagagtgaacgcggaagggtttgaatct
gacccaaagaggcaaaaacggaatgggcattcatctccttcctcttcaccacctccacct
gcctttgaaggctcccttcttcctggttttaattacggcgatgaggatgacgaggacaac
cagagaaggccacctgttgatggctatagaggggatggtggtgataatcaaagggatata
aaaagtggggttgaagttgaagaagaagaagaagaagaagatgatgatgatgatgatgat
cttgaacaaggactttacaggcggagccgtgaaattgaggttaggagggattgtccatat
cttgacgctgttaatcgccaggttttggattttgattttgagaagttttgttctctgtct
ctgtcaaatttgaatgtgtatgcatgtttagtttgtgggaagtattaccaaggaagaggg
aagaagtcccatgcatatacgcatagccttgaagctggacaccatgtttatatcaatctt
cgaacagagaaagtatattgccttccggatggatatgaaatcagtgacccgtcattggat
gacattagacatgttctgaacccaaggtttactgaggaacaagttgagcagattgacaaa
aacaagcaatggtctagggcacttgatggttctgattaccttcctggaatggtggggctc
aataacattaaggagactgattttgtcaatgtcacaattcaatctttaatgagagtcact
ccactgagaaacttcttcctcatccctaagaattatcaacattgcaagtctccgcttgtt
catcgatttggggagctcacgagaaagatatggcatgcacggaacttcaaaggacaggtg
agcccacatgagttcctgcaggcagttatgaaagccagtaagaaacggtttcgaatagga
gcgcaatctgaccctgttgaattcatgtcatggctgcttaatacactgcatgcagatctt
agaacttcaaagaaagatagtagcatcatctacgagtgctttcagggggaactggaggtt
gtgaaggagattcctaagaaaggtattgagaagaaagaaaatggtgatgaccagaataca
gatgttgtgactgaaaataatggcattgtcaaggaaaggtacaaaatgcctttcttaatg
cttggattggatttgcccccaccacctcttttcaaagatgttatggaaaaaaatatcata
ccccaggttccactgttcaatattttgaagaaatttgatggggacactgtgactgaagtg
gtccgacctcgcatagccaggatgaggtatcgagtcacccgattaccgcagtatcttatt
ctccacatgcagcgatttaccaagaacaacttctttgtggaaaagaatccaactttagtc
aactttcctgtgaagaaccttgaattgaaagactacatccccttgtcaaccccaaaagag
aatgagagaatgcgttcaaagtatgatttgatcgccaacattgttcatgatggcaaacct
ggtgaaggttcatacagggtatttgtacagagaaagtctgaagaattatggtatgagatg
caggatcttcatgtttcagaaactcttccccagatggttgccctttctgagacttatatg
cagatatatgagcagcagcagtaa
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