KEGG   Prunus mume (Japanese apricot): 103327021
Entry
103327021         CDS       T03196                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03030  DNA replication
pmum03410  Base excision repair
pmum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103327021
   03410 Base excision repair
    103327021
   03420 Nucleotide excision repair
    103327021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmum03032]
    103327021
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103327021
Enzymes [BR:pmum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103327021
DNA replication proteins [BR:pmum03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    103327021
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      103327021
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 103327021
NCBI-ProteinID: XP_008227515
LinkDB
Position
LG1:8796450..8824737
AA seq 2219 aa
MSGFQSRKRDRGSSWSSKKQKVMRSAEEELESKLGFDLFSEGDKRLGWLLTFASSSWEDQ
DTRKVYSCVDLYFVSQDGSAFKSKYKFRPYFYAASKEKTEMDVEAYLRRRYENQIADIEI
VEKEDLDLKNHLSGLRKSYLKLSFDNVQQLMNVKSDLLHVVERNHAKFDVADAYESIVIG
KREQRPQDFLDCIIDLREFDVPYHVRFAIDNDVRCGQWYDVSVSSTGVMLEMRTDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPE
FEGFFKVTNVKNEVELLRHWFAHMREVKPGIYVTYNGDYFDWPFLETRAAYHGLKMSDEV
GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYHPLEVNPEDMVR
FAMEKSQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYKANVICPNKHQSDPEKFYKNHLLESETYIGGHVECLESGVFRSDLPTSFKLDASAY
EQLINNLDRDLQYAIRVEGKMDLESVSNYEEVKSSILEKLVRLRDEPIREESPLIYHLDV
AAMYPNIILTNRLQPSSIVTDEICTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDYYHLK
KQIESEFVDGSNSKLSKSFLELPKMEQQSRLKERLKKYCQKAYRRVVDKPVTELREAGIC
MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCA
LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARTNTNDQYQTLTDPIGNTYTTHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDVADSELLEYISESSTMSKSLADYGE
QKSCAVTTARRLANFLGDSMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKF
YVRKWCKVSSDVGIRSIIDWSYYKQRLGSAIQKIVTIPAAMQKVANPVPRVAHPDWLHKK
VREKDDKFRQRKLVDMFRSLNRDHLLEKNSDAMGSNHAIDEEIVEDLEDFNRKSSSINGP
RPIVRCYEVNNKKNSVETAGQIDSQQQQTNNKENELQEQNAVSSETIDRNVDYHGWLQIK
KRKWKDTLDRRKKQRLNNARSAHHANNEVLGGGRNRKEPQGKGVNSYFRRNEEALTRCHW
QILQLVPSSQGDQFSAWVVVEGIMLKIPVTVPRVFYINSKAPIEKLFEKMSEEKPQGKNV
NKTLPHGRRAYNLYEAIIDEGRFKTISKKLAALLGDPEVEGIYETKVPLEFNALVQIGCV
CKVDKTAKKRNVQDGWSVSELQMKTTTECTYLDESISFFYLYQSTSEGRAIFIAYFPASR
TITVVVVNPYQNKDLSASFLEKQFREACQALSIQPPPRNGIIIKVDYVGFPKDAEMILHR
AINEHRHEHHGPTVAVIECPNFQLMKSSIGALDDFPCVSIPSNARDSNYQVLGWQQVAAK
IGMQRCAASPQWLRERISLSRYAHVPLGNFELDWLIHAADIFFSRALRDQQQVLWISDDG
IPDLGGINDEDTCFADEVYQHDFSFPGAYRKVTVELKIHHLAVNALLKSNQVNEMEGGAL
LGFESDVNSGVHTSDLHVGFDEATSCAPTLRVLKQLIQRCLANAVTSGNVYADALLQHLY
RWLCSPQSKLHDPALHRILHKVMSKVLAILMIEFRKLGAKIIFANFYKVIIDTGKFDLSG
AKAYCDSLLKTLQARELFEWIELEPLQFWHSLLFMDQYNYGGIPARADGSMHGEAQMDIV
SSWNIAEYLPKKIQDHFVYIVSQFLYVPWDYEQKQAAVRTSLQNDSNCTPSITVAAAETF
ESHMIDFLKGQISSYFTDKLLGIVHDTILHMKELNKSEDGHHTSPGLPQLAGDIHKGDAA
LEFIKHVCGVFSLDQNVHHDVMVMRRNLLKYLRVREFAPEAEFRDPCAFFTLPNVICSYC
NDCRDLDVCRDSALLAGEWRCVVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRC
KQVKAAHLADQCVCAGSYKCREDATKFHSKMELIWKIAIHQKFQLLQECTEWILEVDHS
NT seq 6660 nt   +upstreamnt  +downstreamnt
atgagcggcttccagagccgaaaacgggaccgtggaagctcatggagctccaagaagcag
aaggttatgcgcagcgctgaggaagagctcgagtcgaagctagggttcgatctgttctcc
gaaggcgataagcggctcggatggctgctcactttcgcatcctcatcttgggaggatcaa
gacacccgtaaggtttatagttgcgtcgatttgtattttgtttcgcaggatggttctgct
ttcaagtcaaaatacaagttccgcccttatttctatgcagcctcaaaggagaaaacggaa
atggatgttgaagcatatttgagacgacgatatgaaaatcaaattgctgatattgaaata
gtggagaaagaagaccttgatctgaaaaaccatttgtctggcctacgcaagtcctaccta
aagctatcatttgataatgttcaacaactaatgaatgtcaagagtgacctattacacgtt
gtcgaaagaaaccatgccaaatttgatgttgcagacgcttacgagtcaatagtaatagga
aaacgagaacaaaggcctcaggattttctagattgtattattgatcttcgtgaatttgat
gttccctaccatgtccgctttgccattgacaatgatgtaagatgtggccagtggtatgat
gttagtgtatccagtactggtgttatgcttgagatgaggacagatcttctgcagcgcgct
gaagttcatgtttgtgcatttgatattgagacgactaagctacctttgaaatttccagat
gctgaatatgatttaataatgatgatttcgtacatggttgatggacaaggttacctgatt
attaacagagagtgtgttggggatgatatagaggatctggagtacactcccaaaccagaa
tttgaagggtttttcaaggtgacaaatgtgaagaatgaggtagagcttctaagacactgg
tttgctcatatgcgggaggtgaagcctggaatttatgtcacatacaatggtgattatttc
gactggcctttcctggaaaccagagctgcatatcatgggttaaaaatgagtgatgaggtt
ggatttcaatgtgacaagaaccagggggaatgccgggctaaatttgcttgccatcttgat
tgttttgcttgggtcaaacgtgatagttatcttcctcaagggagccaaggccttaaggct
gttacaaaggcaaagttaggttatcatcccctggaggtgaatccggaggatatggttcgc
tttgcaatggaaaaatcacagatgatggcatcatattctgtctctgatgctgttgcaact
tattacttgtatatgacctatgttcatccattcattttctctcttgcaactattattcca
atgtctccggatgaggttttgcgcaagggtagtggaaccctttgtgaaatgcttctcatg
gtccaggcatacaaggcaaatgttatctgccctaacaaacaccaatctgaccccgaaaag
ttctataaaaatcaccttttagagagtgagacttatataggtggccatgttgaatgcctt
gaaagtggtgtgtttagatctgatcttccaactagttttaagcttgatgcctctgcctat
gagcaattgatcaacaaccttgatcgagatcttcaatatgctataagagtagagggtaag
atggacttggaatccgtgtccaattatgaagaagtgaagagttctatattggaaaagctt
gtgaggctgcgagatgaacctatacgtgaagaaagcccccttatttatcatctggatgtt
gctgcaatgtatcccaacattattttaacaaataggcttcagccatcctcaatagttaca
gatgagatctgcactgcttgtgatttcaaccgtccaggaaaaacttgtcttcgcaaactt
gaatgggtttggcgtggagaaatattcatggcaaagaaaagtgactattatcatttgaag
aagcaaattgagtctgaatttgttgatggttccaattccaagctgtcaaaatcttttctt
gagttgcctaaaatggagcagcaatcgaggctcaaagagcgtctaaaaaaatactgtcag
aaggcatatagacgagtagtggacaagccagtcactgaacttcgggaagctgggatttgc
atgagggaaaattcattctatgttgacacagttcgcagctttcgagatagaaggtatgag
tacaaagggcttaataaggtttggaaggggaagttgtctgaagccaaggctagtgggaat
tctataaaaatccaggaagcacaagatatggtagtgctttacgattcattacaacttgca
cataagtgtatacttaattccttttatggatatgtcatgcgcaagggtgcaaggtggtat
tcaatggaaatggctggagtagttacatatactggagctaaaattattcagaatgctcgc
ttgttggttgagaaaattggaaaacctcttgaattagacacagatggtatctggtgtgcg
ctccctggatcttttccggagaactttacattcaaaacaaaagacttgaagaagaagctg
actatctcatatccatgtgttatgcttaacgttgatgtagcaaggaccaatacaaatgat
caataccagactcttacagatcctattggaaatacttacacaactcatagtgaatgttct
attgaatttgaagtggatggaccctacaaggcaatgattcttccggcttctaaagaagaa
ggaattctaattaagaagcgatatgctgttttcaatgatgatgggacccttgctgaactt
aaaggttttgagatcaagcgtagaggtgagctgaagctcatcaaagttttccaggccgag
ctttttgataagttccttcacggttctactttagaggaatgctattcagcagtcgcttct
gtcgccaatcgctggcttgatctccttgataatcaaggaaaggatgttgcagacagtgag
ttgcttgaatatatatcagagtcaagcacaatgagcaagtctttagcagactatggagag
caaaagtcatgtgcagtgaccactgcaagacgtcttgctaattttctcggtgattcaatg
gtcaaagataaaggactgcgttgccagtatatagttgcatgtgaaccaaagggcacacct
gtaagtgagcgtgctgttccagttgcaatatttgaaacagatgcggaaatcatgaagttt
tatgtacggaagtggtgcaaggtttcatcagatgtcggcattcgatccattattgactgg
tcctattacaagcaacgtcttggttcagcaattcagaaaattgtcaccattccggctgca
atgcaaaaggtcgcaaatcctgttcctagggtagctcatcctgattggctgcataagaag
gttcgtgagaaggacgacaaatttcgacagcgcaaattggttgatatgttcaggtcattg
aacagggatcatttgctggaaaagaacagtgatgctatgggctctaatcatgcgattgat
gaagagattgttgaagatttggaagacttcaacagaaaaagcagttccataaatggaccc
agaccaattgtccgatgttatgaagttaataacaagaaaaattcagttgagacagctggt
caaatagattcacagcaacaacaaactaataataaagaaaatgagcttcaagagcaaaat
gccgtctcgtctgaaactattgatagaaatgtagattatcatggctggcttcaaataaag
aagaggaaatggaaagatactcttgacaggaggaagaagcaaagattgaataatgcgagg
tctgcgcaccatgctaataatgaggtgcttggtggtggtagaaatcgtaaagaaccacag
gggaaaggtgttaattcatattttaggaggaatgaagaagccctaacacgctgtcactgg
cagatattacaactagttcccagttctcagggtgaccaattttctgcttgggttgttgtg
gaaggaatcatgcttaagattcccgttaccgttccaagagttttttacatcaattctaaa
gcacctatagaaaaactatttgaaaaaatgtctgaagaaaaacctcaaggaaagaatgtc
aacaagactcttcctcatggaaggcgtgcctacaacctgtatgaggctataatagatgag
ggtcggtttaagacaataagcaaaaagcttgcagctcttcttggcgatccagaagttgag
ggaatatatgaaacaaaggtgcctttggagttcaatgcacttgttcagattggttgtgtc
tgtaaagtggataaaactgctaagaagagaaacgtccaggatggttggagtgtgagtgaa
ctgcaaatgaagacaactactgagtgcacatatctggacgaatcgatctctttcttttac
ttgtaccagagcacatctgaagggcgagctatatttattgcctattttcctgcgtcaaga
acaataactgttgtggtggtaaatccttatcaaaataaagatttgtcagcatcttttctt
gagaaacaatttcgtgaagcttgccaagcgttatcaattcagccacccccgaggaatggt
atcattattaaggttgactatgttggatttcccaaggatgctgaaatgattttgcaccgt
gcaattaatgagcacagacatgaacatcatggacctacagttgctgttattgaatgccca
aattttcagttgatgaagtcgagtataggagctcttgatgattttccttgtgtgagcatt
ccctctaatgctcgcgatagtaactatcaggttcttgggtggcaacaagtggcagcaaaa
attggaatgcaacgttgtgctgcatcacctcagtggttgagggagagaatttccctctca
agatatgcccatgtaccattgggtaattttgaacttgactggcttatacatgcagcagat
atcttcttttcaagagcactacgggatcagcaacaggtgctttggatatctgatgatggt
attccagatctaggaggcattaatgatgaagatacatgttttgccgatgaggtctatcaa
catgacttttctttcccgggagcatataggaaggtcactgtggagctaaagatacatcat
ctggctgtaaatgctcttctgaaaagcaaccaggtgaatgaaatggaaggaggtgctttg
ctaggatttgaatcagatgtgaactcaggagtacatacgtctgatctacatgttggcttt
gatgaagctacctcatgtgcacctaccctccgtgtcttgaaacagttgatccagaggtgt
cttgcaaatgcagtaacatctggaaatgtgtatgctgatgcactattgcagcatctatat
cgatggctttgcagcccccagtctaaacttcatgatccagctcttcaccgcatactccac
aaggtcatgtcaaaggtgcttgcaattttaatgatcgagttccgcaaattgggtgccaag
attatatttgcgaatttctacaaggttattatagacacaggaaagtttgatctgtcagga
gccaaagcttattgtgatagcttgcttaaaacactgcaagcaagagaactatttgagtgg
attgagcttgaaccattgcaattctggcattccctgcttttcatggatcagtataactat
ggtggaattccggcaagagctgatggaagcatgcatggtgaagctcaaatggatattgta
tcaagctggaatatcgctgaatacttacccaagaaaattcaggaccattttgtttatatt
gtctctcagtttttatatgttccctgggattatgaacaaaagcaggcagcagttagaaca
tctttacagaatgacagcaattgcacgccatcaatcactgttgcagctgctgagactttt
gagtctcatatgatagattttcttaaaggacagatcagctcatactttacagataaactt
ctgggaattgttcatgataccatacttcacatgaaggagctgaacaaatctgaggatggc
catcacacatctcctgggctgccacaacttgctggtgatatccacaaaggggatgcagcg
ctggagttcattaagcatgtctgtggtgttttctcccttgaccaaaacgttcaccatgac
gttatggtaatgagaaggaatctgttgaaatatttgcgtgtgagggagtttgcacctgaa
gccgagtttcgtgatccctgtgcattcttcaccttaccaaatgtcatttgcagctactgc
aacgattgtagagacctggacgtgtgccgtgactcagctctactagctggggagtggcgc
tgtgttgtgccgcaatgcgggcagccttatgacagagaggtcatggagaatgcccttctt
cagattgtacggcagagagagcgcctctaccatctacaggatctggtatgccttaggtgt
aagcaagtgaaagctgcacacttagcggatcaatgtgtatgtgctggctcatataaatgc
agggaggatgcaacgaaattccatagcaagatggagttaatttggaagattgccattcat
cagaaattccaacttctccaagagtgcactgaatggattttagaagttgatcactcttaa

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