Prunus mume (Japanese apricot): 103327045
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Entry
103327045 CDS
T03196
Name
(RefSeq) protein CHROMATIN REMODELING 24 isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103327045
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
103327045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
GCOM2
Motif
Other DBs
NCBI-GeneID:
103327045
NCBI-ProteinID:
XP_008227544
LinkDB
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Position
LG3:21166506..21179167
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AA seq
1137 aa
AA seq
DB search
MAERKSSKKPQSLNDSHYRLLQDLGSPSAKPFSRLAEDDKEEMDDLKPSMVKIEGRASSK
DQSNNDNNRSDHNIPHFSLTGFDSSPETIVEPEKPTKVKVEGRRRLCKISSRQENAPAEK
AAVLDEPNFSDITDFESPTLPQRNASKTSAKTGGNEIRDILDDLSSRLEFLSIERRGARK
ADMAEGSFPSAICKEVDDGKKVDLPEYESAGSSFSLASDMSDSSLDATKKARNGVESVVD
DYEDKGLIQYEPEGDKFGKQTHGMKITGKGVGGNESRSMGAKLVLVGDSFVSETEGEEAK
AYLQSEPRGDNYVDRLPTKHDERQKKREASLVDKKPKTECRSLVSKGGKGEVDDEDGCVV
LHDKKIVKELGRHGGNSKEHYVSDEVIVVDDSTDDSGLEDDSSITLSGLKSTYKLPGKIA
TILFPHQRDGLKWLWSLHCQGKGGILGDDMGLGKTMQICSFLAGLFHSCLIKRVMIVAPK
TLLSHWIKELSFVGLSDKIREYYGTCAKARQYELQYVLQDKGVLLTTYDIVRVNSKSLRG
GRYVHDDEGEDIIWDYMILDEGHLIKNPSTQRAKSLLEIPCAHRIIVSGTPLQNNLKELW
ALFNFCCPELLGDKQWFKEKFESLILRGNEKNASDREKRIGSTVAKELRERIQPFFLRRL
KNEVFNEDDGQTNAKLSKKNEIIVWLRLTGCQRKLYEAFLKSELVLSAFDGSPLAALTIL
KKICDHPLLLTKRAAEDVLEEMDSMMKPEDTCMAEKLAMYIADVAEKEDLDERQDFDEKH
ANISCKISFILSLLENLIPEGHNVLIFSQTRKMLNLIQESLVSNGYKFLRIDGTTKAIDR
MRVVDDFQEGNGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQN
KDVIVYRLMTCGTVEEKIYRKQIYKGGLFKTATEHKEQMRYFSQQDLCELFNLPKEGFDI
SITQQQLYEEHDSQHTMDESFKSHIEFLETQGIAGVSHHSLLFSKTAPVPVVEEEQEAER
IRGASTAGRSSSSSLLECNVNGAEYAFKPDVILNKKPSSPNDAGKLTESEIKQRINRLSQ
TLANKAMVSRLPDKGEKIQKQIAELNSELYRLGTVKGNERNVINLDDITGEFERVLI
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaggaaaagcagcaagaaaccacagagcctaaacgacagccactatcgcctc
ctccaagacctcggttctccttctgctaaacccttttccagactcgctgaggacgataaa
gaggaaatggacgacttaaagccatctatggtgaagatcgaaggcagagcttcatccaaa
gaccaaagcaacaacgacaacaaccgcagtgatcataacattccccatttctcactcact
ggttttgattcttctcctgaaacaattgtagaaccagaaaaacccacaaaggttaaggtt
gaaggtagacggcgtctttgtaaaatctcatcgcggcaagaaaatgctccagctgagaaa
gcagcggtgcttgatgagcccaatttttctgatattactgattttgagtcaccaacactg
cctcagaggaatgcgagtaagactagtgccaaaactggtgggaatgagattagggatatt
cttgatgacttgagctcgaggcttgagtttctgtcaatcgagaggaggggtgccagaaaa
gctgacatggctgaaggttctttcccttcagctatttgtaaagaagttgacgatggaaag
aaagttgatttgcctgagtatgagagtgcgggctcttcattttcacttgcttctgacatg
tctgattcttctttagatgctactaagaaggctagaaatggtgttgagagtgtggtagat
gattatgaagataagggacttattcaatacgagcctgagggtgacaaatttggtaagcag
acccatggtatgaagattactggtaaaggtgttggtggaaatgaatccagaagtatgggt
gcgaaattagtgcttgttggggattcttttgtgtctgaaactgaaggagaggaggcaaag
gcttatttgcagagtgaaccccgtggtgataattatgtggacaggctgcctacaaaacat
gatgaaagacaaaagaaaagagaagcttcattggtggataagaaaccaaaaactgagtgc
cgttccttggtttctaaaggtgggaaaggagaggttgatgatgaggatggttgtgtagtt
ttgcatgacaagaagatagttaaagaactggggaggcatggtggtaattctaaagagcac
tatgtttctgatgaggttattgtggttgatgattctacagatgattctggtttggaggat
gatagttctattactttaagtggcctcaaatctacttacaagttgccaggtaagattgca
acgattttgtttccacatcagcgtgatggcctaaagtggctatggtctctgcattgtcag
ggtaagggtggaatcttaggtgatgacatgggcctgggtaaaacaatgcagatttgtagc
tttttagcagggttatttcattcttgtttgatcaaaagagtaatgattgtggcccctaaa
acgctgctttcccattggattaaagaattatcattcgtgggtctctctgataagataaga
gaatactatgggacttgtgccaaagctcggcaatatgagcttcaatacgtactacaggac
aaaggcgttcttctcacaacttatgatattgtgcgggttaattcaaaatctttaagaggg
ggccgctatgtccatgatgatgaaggtgaagatatcatatgggattatatgatacttgat
gaggggcatctcataaagaatccaagtacacaaagagccaaaagtttgcttgagattcct
tgtgcccataggattattgtaagtggcacgccattgcaaaacaatctgaaggagttgtgg
gccttattcaacttctgttgccctgagctactgggtgataagcaatggtttaaggaaaaa
tttgagtctctcattcttcgtggaaatgagaaaaatgcttcagacagggaaaagcgtatt
ggttccacagttgcaaaggaactaagagaacgtattcaaccattttttctgcgccgctta
aagaatgaggtatttaatgaagatgatggtcaaacaaatgccaaactttctaaaaagaat
gagatcattgtttggttaagattgactggctgtcagcggaaactttatgaagcttttcta
aagagtgagctggttctttccgcttttgatggctccccattggccgcacttacgatcctg
aagaaaatatgtgatcatccacttttattgacaaagcgagctgctgaagatgtactagaa
gagatggattcgatgatgaagccagaggatacttgcatggcagaaaaactagcaatgtac
atagcagatgttgctgagaaagaggacttggatgagagacaggactttgatgagaagcat
gccaacatctcatgcaaaatatcttttatattgtctttactggaaaacttaattccagag
ggacataatgttcttatcttttctcaaactcgaaagatgcttaatcttattcaggaatca
ctagtgtccaatggttacaagttcttacgcatcgacggtaccacaaaagccattgacaga
atgagggttgttgatgacttccaagagggtaacggggctcccatatttctcctaacatca
caagtaggtggtttgggccttacgcttacaagagcagatcgtgtgattgtggttgatcct
gcttggaacccaagtacggataaccaaagtgtggatcgtgcatatcgaattgggcaaaat
aaggatgtcattgtatatagattaatgacttgtgggactgttgaagagaagatatacaga
aaacagatatacaaggggggattgtttaaaactgcaaccgagcataaagaacagatgcgg
tactttagtcaacaggatctatgtgaactttttaatctcccaaaagaaggttttgatatc
tccattactcagcagcagctatatgaggagcatgatagccagcacacaatggacgaatcc
tttaagtcccatattgaattcttggaaacacaaggcatagcaggagtcagtcatcacagt
ttactcttctccaagacagcacctgtaccagttgtagaggaagagcaggaagctgaaagg
atcaggggagcttcaactgcaggaaggtcatcttcaagttctttactcgaatgcaatgtg
aacggggctgaatatgctttcaagccagatgtaatattaaacaagaagccttcttcacca
aatgatgcgggtaaactgacagaatcggagattaaacagagaatcaataggctgtcacaa
actcttgcaaataaggctatggtttcaagattaccagataagggagagaagatacaaaag
caaattgctgagctgaattctgagctttatagacttggtacagtgaaaggaaatgagaga
aatgttattaacttagatgatataactggggagtttgaaagggtgttgatataa
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