Prunus mume (Japanese apricot): 103327228
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Entry
103327228 CDS
T03196
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03440
Homologous recombination
pmum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103327228
03460 Fanconi anemia pathway
103327228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103327228
03036 Chromosome and associated proteins [BR:
pmum03036
]
103327228
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103327228
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103327228
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103327228
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103327228
FA (Fanconi anemia) pathway
Downstream FA components
103327228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
BRCA2DBD_OB2
Motif
Other DBs
NCBI-GeneID:
103327228
NCBI-ProteinID:
XP_016648323
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All DBs
Position
LG3:complement(24271757..24279857)
Genome browser
AA seq
1096 aa
AA seq
DB search
MSTWQMFADAGNNYRWYPDTPNDAVYPTTTTTTLHSDSERQQQLKSSSRLPSMADLLLQG
CSKLAEAQTQNQRNGVDADDGVGMFCNGFGRPVAIKPSSLAKASSLLQTGTGQVQTTNSR
GGFSNSLFQTGSGKMVNISPEGLVRAKTLLGLGDDSDHSKLPGSNSGGVVMDAASISRSP
LINKTVSVQTRCKKNEADLNFMSPERVNLTPDKPSSIKFHTAGGRSISVSTDALQRARSL
LGDPELGSFLNEGDAGDSVFTFSKGRGHDERTPFSHQKMTRKNFLTKTSVSPLQSSSNQV
QSSLAINSGTNLITQFDVVSNESVCKSNSKLPYRQEKPLSDKPCIIKTVENNYLENGGSL
RINPVGKSLAKPLVDISNTVGTTTTNSTQKNGVKRRLGRSSISPFKKPRTSNSSTPLHKN
VPPVRNGLSTLSSDNSCSKRRVSTRYPFSVTRMHVKKYFGMPPPDQNMLECLSDPVRRIT
ASNAEKYMFLDESGLNCIGAEAFVHMLARSGALMQYTSREWVTNHYKWVVWKLACYERCH
LAKSFGNFLTVSNVLEELKYRYEREVNHGHRSAIKRILEGDASPSSMVVLCISAIRSNCD
PNMETSSGAENSGAAKVELTDGWYSVDAVLDALLSKQLASGKLFVGQKLRIWGAALSGWA
GPVSPLEVLTVARTVTFRLHINGTYRAHWADRLGFCQGVGAPLAFNCVKSGGGAVPCTLL
GVTRIYPVLYKERLSNGRSIVRSERLESQMVQSYQERRSDVIEGIISEFQRGLEHSHLCN
DSDSEGAKLLKILETATEPEILMAEMSSEQLKSFTKYRSKLEAIKQSDMEKSILKALEDA
GLSEREVTPFMRVRVVGLTRKLCHGKDSSKEGLITIWNPSEKQKTELVEGCAYRVSGLIP
TSSDVDTLHLQVRGSTTTWQPLSQQAVEHFKPFFNPRKSVLLSDLGKVPLSRKGILYLFV
VFVGEVYIAAHQKKQWVFVTDGSISELNSEESCDSLLAVCFCSPYIGVDSVAPINYNLTG
TTVGFCNLTKRAKDQMNSLWVAEATETSAYFLRFDTPHCSHLKDAAVSTERWGRISSLTI
NRLKERVLCIIGASKG
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatgttcgccgacgccggcaacaattaccggtggtatcccgacaca
ccaaacgacgccgtttatcctacgactactactactactcttcatagtgatagtgaaagg
cagcagcagctcaagtcgagcagtcggctgccttccatggcagatctgctgcttcaaggt
tgttcgaagcttgcagaggcccagactcagaatcagagaaatggcgttgatgctgatgac
ggtgttgggatgttctgcaacggatttggaagacccgtcgccatcaagccatcctcctta
gccaaagcgtcgtcgcttcttcaaactggaactggccaagtgcaaactacgaatagtaga
ggtggtttctctaattcccttttccagactggctctgggaaaatggttaatatatctccg
gagggtcttgtcagggcaaagacattgcttggtttgggagacgacagtgatcacagcaag
cttccgggttccaacagtggtggtgtggttatggatgctgcatccatttcaaggtctccg
ttaattaataagactgtttcagtacaaactagatgtaagaagaatgaggctgatctaaat
tttatgtcgcctgaaagggttaatttaactccggacaaaccttcatcaatcaagttccat
acagctggaggaagatctatatctgtttctactgatgcactgcaacgtgcaaggagtcta
cttggtgacccggagttagggagtttcttgaatgagggggatgcaggtgactccgttttc
acattttcaaaaggtagaggacatgatgaacgcactcccttctcccatcagaaaatgact
aggaaaaactttttaactaagacttctgtatctccactgcaatcatcgtctaatcaagtg
cagtcgtcgttggctataaattccggcactaacctgattacacaatttgatgttgttagc
aatgaaagtgtctgtaagtcaaacagcaagttaccttatcggcaggagaagccccttagc
gacaaaccttgtatcatcaagacagtagaaaacaattatttggaaaatggtggtagtttg
aggattaatcctgttggaaagtcactagccaagccattggttgatatttcaaataccgtt
ggcaccactaccacgaatagcacacaaaagaatggtgtaaagaggaggcttggaagaagt
tctatttctccattcaagaagcctcgcacttccaactcctccactccattgcacaagaat
gttcctcctgtccgtaatggtttgtctactttgtcctccgacaattcatgttccaaaaga
agggtttctactagatatcctttctcagtaactagaatgcatgtgaagaaatattttgga
atgccaccacctgaccagaacatgttggagtgtttgtcagacccggtgagaagaattaca
gcaagtaacgcagaaaagtacatgtttcttgatgaatctggtttaaactgcataggagca
gaagcttttgtccacatgttggctcgttctggagctttaatgcaatatacttccagagag
tgggtcacaaatcactacaagtgggttgtctggaaactggcttgctatgagagatgtcat
ctagctaagtcgttcggaaattttttgacagtctccaatgtgcttgaggaattgaagtat
agatatgaaagagaagtgaatcatggtcaccgatctgcaattaagaggattctggaagga
gatgcatccccttcttcaatggtggttctatgcatttcagctattcgttcaaattgtgac
ccaaatatggagactagctccggagctgaaaatagtggtgctgcaaaagttgagcttact
gatgggtggtattcagtggatgctgtactggatgcactcctgtcgaagcagcttgctagt
ggaaaattgtttgttggacagaaacttcggatctggggagcagcactctctggttgggct
gggcctgtttcaccccttgaggttctcactgtggcaagaacagttactttccggctgcac
ataaatggaacatatagagctcattgggctgatcgattgggattttgtcaaggtgttggt
gctcccttagcatttaactgtgtcaagagcggtggtggtgcagtcccttgcactcttcta
ggagtcacacggatataccctgttctctacaaagagaggttaagtaatggaagatctatt
gtaagatcagagaggttggagtcccaaatggtgcaatcataccaagagaggcgctctgat
gtcatagaaggcattatatctgagttccaaagaggactagaacattcacatttgtgtaat
gatagcgatagcgaaggagcaaaactcttaaaaatactagaaacagccactgaacctgaa
attttaatggcagaaatgagttcagaacagttgaaatcttttaccaaatatcgatcaaag
ctggaggcaattaagcagtcagacatggagaaatcaattttgaaagcactggaagatgct
ggcttaagtgagagggaagtcacgccattcatgagggtgagggtggttggactaacaaga
aaattatgtcatgggaaagacagttctaaagaaggcctaataacaatctggaacccatct
gagaagcagaagactgagctggttgagggatgtgcatatcgtgtttctggacttatacca
acaagttctgatgtggatactctacacttgcaagtgagaggatccacaacaacatggcag
cctttatctcagcaggcagttgaacactttaagccttttttcaatcctcgcaaatcagtc
ttattgtcagatttgggtaaagttcctctttccagaaaagggattttatatttgttcgtt
gtgtttgtgggggaggtttatatagctgctcaccagaagaaacagtgggtgtttgtgaca
gatggctccatatctgaattaaattcagaagaatcatgtgattctctactggccgtctgc
ttctgttcaccatacattggcgttgattcagttgctcctataaactataacctcacagga
acaacggttgggttttgtaatcttaccaagagagcaaaggaccaaatgaattccctttgg
gtagcagaagctacagaaacttcagcttactttttaagatttgacactccacattgttct
catctcaaagatgctgctgtctccactgaaagatggggaaggatctctagcttgactatc
aataggcttaaggagagggttctgtgtattattggtgctagcaaaggatag
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