Prunus mume (Japanese apricot): 103327260
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Entry
103327260 CDS
T03196
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103327260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmum02000
]
103327260
04147 Exosome [BR:
pmum04147
]
103327260
04090 CD molecules [BR:
pmum04090
]
103327260
Enzymes [BR:
pmum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103327260
Transporters [BR:
pmum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103327260
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103327260
CD molecules [BR:
pmum04090
]
Proteins
103327260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
RsgA_GTPase
ABC_ATPase
Zeta_toxin
AAA_5
AAA_15
AAA_21
DUF87
AAA_30
AAA_25
Motif
Other DBs
NCBI-GeneID:
103327260
NCBI-ProteinID:
XP_008227785
LinkDB
All DBs
Position
LG4:complement(237109..244009)
Genome browser
AA seq
1297 aa
AA seq
DB search
MAGGNGVNGGTPQEHEETTLKNQVEEKSSGTNGDHQGSDKSNGDEKNEKIPFFKLFSFAD
KTDYILMLFGTIGAIGNGSCMPLMTILFGEMINSFGNNQNNTDIVSVVSKVSLKFVYLAI
GAAVAATLQVACWMVTGERQAARIRGLYLKTILRQDVGFFDMETNTGEVVGRMSGDTVLI
QDAMGEKVGKFVQLLSTFLGGFIIAFIKGWLLTLVMLSSIPLLVASGAAMSIIITKMATR
GQSAYAKASNVVEQTIGSIRTVASFTGEKQAITSYNKYLGDAYRSGVHEGIAAGVGLGMV
MLVVFSSYALAVWFGSRMIRDKGYSGGDVLNVIIAVLTGSMSLGQASPCLSAFAAGQAAA
FKMFETISRKPEIDAYDERGRTLDDIRGDIELREVYFSYPARPEEQIFDGFSLYIPSGTT
AALVGQSGSGKSTVISLIERFYDPRAGEVLIDGINLKEFQLKWIRNKIGLVSQEPVLFAS
SIKENIAYGKDGATLEEIKAAAERANAAKFIDKLPQGVDTMVGEHGTQLSGGQKQRIAIA
RAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADTIAVIH
KGKMVEKGSHSELLKDPEGAYSQLIRLQENNQSEQTAEAQNKSEITTESFRQSSQRMSLV
RSISRNSSVGNSSRHSFSVSFGLPTGLGSMGSVRDNTMADPEAPAKELEHPPKISLRRLA
ALNKPEIPVLLIGTVAAMGNGVILPIFGVLISRVIKTFYEPPHEQKKDSEFWALMFITLG
LASLLAIPGRGYFFSVAGSKLIERIRLMCFEKVVNMEVGWFDEPENSSGAIGARLSADAA
TVRALVGDALAQIVNSIATAIAGLVIAFVACWQLAFIILALIPLIGVNGYVQAKFMRGFS
ADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRRKCEGPTAAGKRQGLISGLGFG
ISFFFLFCVYATSFYAGAKLVEAGKTTFADVFQVFFALTMAATGISQSSSFAPDTNKARI
AAASIFAIIDRKSKIDPSDESGVKLDNVKGEIELRHVSFTYASRPDVQIFRDLSLTIHCG
KTVALVGESGSGKSTVVALLQRFYNPDSGHITLDGTELGKFQLKWLRQQMGLVSQEPVLF
NDTIRANIAYGKDGEATEAEIIAASELANAHKFISSLHQGYDTVVGERGVQLSGGQKQRV
AIARAIIKSPKVLLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIA
VVKNGVIVEKGKHDTLINITDGFYASLVALHISASTT
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggccggaggaaatggtgtcaatggtggtacacctcaagagcatgaggagaccactttg
aaaaaccaagtagaagagaaaagctctggcacgaacggggaccatcaaggctcagacaag
agcaatggagatgagaaaaatgaaaaaattccatttttcaagctattctcatttgcggat
aagactgattatatcttgatgctcttcggcacaattggtgccattgggaatggatcatgt
atgcccctcatgacgatattgtttggggagatgattaattcttttggaaataatcaaaac
aatacagacatagttagtgttgtttccaaggtctctctaaaatttgtctatttggccatc
ggggcagctgtggcagcaactcttcaggtcgcttgctggatggtaacaggggaaaggcaa
gctgcaaggataaggggtttgtatttgaaaacaatattgagacaagatgttggtttcttt
gatatggaaacaaacactggagaggtcgttgggagaatgtctggcgacactgttctcata
caagatgccatgggtgagaaggttggaaaatttgtacagctgctttcaacattcctcgga
gggtttataatagcattcatcaaagggtggcttcttactcttgtcatgttgtcctctatt
cctctgcttgtggcatctggtgcagctatgtccatcattataaccaagatggcaacccgt
ggacaaagtgcttatgcaaaagcatcaaatgtagttgaacagacgataggctccattaga
accgttgcatcctttaccggcgagaagcaagctataacaagttacaacaaatatcttgga
gatgcttacagatcaggtgttcatgaaggtatagctgccggagtaggtcttggcatggtt
atgctagttgtgttcagttcttatgccttggctgtatggtttggttcaagaatgataagg
gacaaaggatattccgggggtgatgtgttgaatgtgattattgcggttttgactggatcc
atgtctctggggcaggcatcaccgtgcttgagtgcgtttgctgctggtcaagctgcagca
tttaagatgtttgagactatcagtaggaagccagagattgatgcttatgacgaaagagga
aggacattggatgacattcgtggagatatagagttgagagaggtttatttcagttatcca
gccagaccagaagaacaaatattcgacgggttctccctttatatccctagtggcaccacc
gcagctttggttggacaaagtggaagtgggaagtcaacagtcatcagtctgatagagaga
ttttatgatccacgagctggtgaagttttgatagatggtataaacctaaaagaatttcag
ctcaaatggattcggaataaaattggtcttgtcagccaggaacctgtactgtttgcatca
agcattaaggaaaatattgcctatggaaaggatggtgctacccttgaagagataaaagcg
gcagctgaacgtgcaaatgctgctaaatttattgataaactgcctcagggggttgacacc
atggtcggtgagcatgggactcagctgtctggtgggcagaagcagagaattgctatagca
agagcaattttgaaagatccacgaatattacttctggatgaagctacaagtgcacttgat
gcagaatctgagaggatagttcaagaagcattggataggattatggtgaaccgaacaact
gttattgttgctcatcgtttgagcacagtgaggaatgcagatacaattgctgtcattcat
aaaggaaagatggttgaaaaaggttcgcactcagagttgctcaaggatcctgaaggagca
tactctcaacttatacgcttgcaagaaaacaatcaatcagaacaaacagcagaagctcaa
aacaaatctgaaataactacggaatcttttagacagtcgagtcaaaggatgtcgttagta
agatccataagtcggaactcctctgtaggaaatagcagccgccactcattttcagtctca
tttggtttacccacaggacttggtagcatgggtagtgtaagggacaatacaatggcagac
ccagaagcccctgccaaggaattagagcaccctccaaagatctcacttcgccgccttgct
gccctcaacaagcccgagattccagtgcttcttattgggactgtagctgcaatgggaaat
ggtgttatacttccaatttttggtgtgcttatttccagggtaataaagactttctatgaa
ccacctcatgaacaaaagaaagattcagagttttgggcattaatgtttattacccttggt
ttggcatcattactagcgatcccaggacgaggatatttcttttctgttgctggtagtaag
ctaattgaacgtatcaggctgatgtgttttgagaaagtggttaacatggaggttgggtgg
tttgatgagcctgagaactcaagtggtgccattggtgcaaggctctcagcagatgcggca
acagtgcgagccctagttggagatgcactagctcaaatagttaatagcattgcgaccgca
attgcaggtttggtcattgcttttgttgcatgttggcagctggcatttattatcctcgca
ttgattcctcttattggagttaatggatatgttcaagcaaaattcatgagaggattcagc
gcagatgcaaagatgatgtatgaggaagcaagccaagttgctaatgacgcagttgggagc
ataagaacagttgcttctttctgtgctgaagaaaaggtaatggaactatacagaaggaaa
tgtgaaggtcctacagcggcaggaaaaagacaaggcttgatcagtggattaggatttggg
atatctttcttcttcctgttttgtgtctatgcaaccagtttctatgcaggagctaaactt
gttgaggctggaaaaacgacatttgctgacgttttccaagttttctttgctttgaccatg
gcagctacgggaatttctcagtcaagctcctttgccccagatactaacaaagccaggatt
gctgctgcttccatatttgcaataatagaccgcaagtcaaagatagacccaagtgacgag
tcaggtgtgaaattggataatgtaaagggagagattgagcttcgccatgtaagctttaca
tatgcatctaggccagatgtacagattttccgagacctcagtttaactattcattgtggc
aagacagttgccctggttggagaaagtgggagtggaaaatccacagtggtagcattgttg
caaagattttataatccggattcaggtcatatcacacttgatggaactgaacttgggaaa
tttcaattgaaatggttgaggcagcagatggggcttgtgagccaagaacctgttttattt
aacgacaccatccgtgccaacattgcttatggaaaagatggggaagcaactgaggcagaa
attatagctgcatcagagttggccaatgcccacaagttcattagtagcttacaccagggc
tatgacaccgtagtaggagaacgtggagtgcaactgtctggggggcagaagcaacgtgta
gccatcgcgcgtgctatcatcaagagccctaaggtattactgttggatgaagctacaagt
gcacttgatgctgaatctgagagagtagttcaagatgcattagacaaagtgatggtaaac
cggaccacggtggtggtcgcccatcgactatccacaatcaagaatgctgatgtgattgca
gtggttaaaaatggagttatcgtagagaaaggcaagcatgatactttgattaatatcaca
gatggattttatgcatccttagttgctcttcacattagcgcttcaactacatga
DBGET
integrated database retrieval system
