Prunus mume (Japanese apricot): 103327274
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Entry
103327274 CDS
T03196
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103327274
Enzymes [BR:
pmum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
103327274
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103327274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_31
Methyltransf_25
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
103327274
NCBI-ProteinID:
XP_008227801
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All DBs
Position
LG4:complement(323370..326224)
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AA seq
464 aa
AA seq
DB search
MEIRCKFWLPKKKRFCANIPLNESLFCGNHTPRSDSPWIPCPIDPSHSVLKENLEGHVRR
CPLLKQVQSLTLQPFYQKGINAGKEEDQEELETFKPKGADDLESSNDPESGSLDNILSEM
KRNAVYSMTVLDFYKLIEKIEHVHESICKDIQDSYKVPEACGIWIKREVDRKLPFQEKHV
MQQVSILGNLEDLGVLNSSLGKERADYDDGTGIPAVVEFGAGRGYLTQMLADCYGIKKVF
LVERKSYKLKADRSLRQKESLILQRLRIDIEDLNLNAVESLREDPYLAIGKHLCGPATDL
TLRCCLGEHRNQSNAELQSVNPNLRGLAIATCCHHLCQWKHYINKKYLLELGITKEEFHA
ITWFTSWAVDADHGADLPDVTDCKLHLESVEKKQCGEDYGVEDIVRNMKAVERAVLGFMC
KKIIDMGRLMWMKEHGLDAQFVKYVPSSVSPENHLLIGRCPRHL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggagattcgatgcaaattttggcttcctaaaaagaagagattttgtgcaaatatcccc
ctcaacgaatctttattctgtggcaaccacacacccaggtccgatagcccgtggattcca
tgtccaatagacccttctcactctgtacttaaagagaatcttgaaggacatgttagaaga
tgcccattactcaaacaagtgcagtctttgactctccaacccttttaccaaaagggtatc
aatgctggcaaagaagaggaccaggaagaattagaaacattcaaacccaaaggagccgat
gatttggaatcttctaatgaccccgagtcggggtctttggataacattctttcagaaatg
aagaggaatgctgtttatagtatgactgtacttgatttctataaattaattgagaaaatt
gagcatgttcatgaatctatatgcaaggatattcaggactcatataaggtaccagaagct
tgtggaatatggattaaacgagaggttgacagaaaattgccatttcaagagaaacatgtt
atgcagcaggtgtccattcttgggaacttggaagatcttggtgtattgaatagttctcta
ggaaaggagagggcggattatgatgatggcactggtatccctgcggtggttgagtttgga
gccggcaggggatacttgacacagatgctggcagattgttatgggataaaaaaggtcttt
ctggttgaaagaaaatcatacaagttaaaggctgatcgatccttgcggcagaaagagagc
ttgatattgcaacgtttgagaattgacattgaggatttaaacttgaatgctgttgagtca
ttgcgggaagatccttaccttgctattggtaaacatctttgtgggcctgcaacagatctg
actttgagatgttgccttggtgaacaccgtaatcaaagtaatgctgaattgcagagtgtt
aacccaaacctgagaggtctagctatagcaacatgttgccatcatctctgccagtggaag
cattacataaataaaaaatatctattagaattgggaatcacaaaagaggaatttcatgca
attacttggtttactagttgggctgtagatgctgatcatggtgccgatctcccagatgtt
actgattgcaaattgcatcttgaatctgttgaaaagaagcaatgcggtgaggattatgga
gttgaagacattgtgagaaatatgaaggcagttgaaagggctgtgttagggtttatgtgc
aagaagattatagatatgggtaggttgatgtggatgaaggaacatggcttagacgcacag
tttgtcaaatacgtcccatccagcgtttctcctgaaaaccatctattgattggtagatgc
ccccgtcatttgtga
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