Prunus mume (Japanese apricot): 103327375
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Entry
103327375 CDS
T03196
Name
(RefSeq) homeobox-leucine zipper protein ROC8
KO
K09338
homeobox-leucine zipper protein
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103327375
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103327375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
CHP02642
MRP-L20
Motif
Other DBs
NCBI-GeneID:
103327375
NCBI-ProteinID:
XP_016649213
UniProt:
A0ABM1LP86
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Position
LG4:complement(1041166..1045089)
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AA seq
704 aa
AA seq
DB search
MELPKGNAGVSGDEQEPSSSRRGNKKYHRHTSEQIQRLEELFKECAHPDDNQRQQLSREL
GLEPRQIKFWFQNKRTQTKAQNERADNTVLRVNNERIQCENFAFREALKNVICPTCGGPP
FGEEERQLCLQKLQLENAQLREEHDKVASLLSKYIGKPISHIDSLASAAGSSFDFSPGSS
MNQGMGSPPLSLNPTNPAVANNAALAYQLKEIPEMEKTHMADTAARAIEELLKSFEINEP
LWIKSPGDGRYLLNRDSYDKIFPRPNHFKSSSARVESSKDSGVVSVSAVQLVDIFLDSSK
WEDLFPTIITNAKTIQVLESGMVGNQSGRLQLMYEQMHILSPLVLSRDFYFLRHCQQIEI
GTWVIVDVSYDFPKETSACQTRSWRLPSGCMIKDMQNGCSKVTWIEHVEVDDKTQTHRLY
RDLICSNVAYGAERWIVTLQRMCERFDYSMDEVAPSCEFGGVITTPEGRRSTMKLSHRMV
KNFCGMLSMAGKLDFPQLSEVHNSGVRVSVRKNTEPGQPNGMVVSVATSLWLPLPSHNVF
NFFRDEETRLQWDVLCNGNPVHEVTRISTGTHPGNCISIIRPFIPTENNMVMLQESYIDS
LGALVIYAPVDIPALNIAVCGEDSSKIPILPSGFVISGDGHPETGPAASNGRSGGSLLTV
AFQILVSCPASSKQLNMESVATVNTLISSTVQKIKAALNCSGLD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagttgccaaagggaaatgctggagtatcaggtgatgaacaagaaccatcgagttct
cgcaggggcaataagaagtatcatcgccatacttctgaacagatacagcgacttgaagaa
ttattcaaggagtgcgcccaccccgatgacaaccagcgtcaacagctgagcagggagtta
gggcttgagccaagacagatcaagttctggtttcaaaataaacgaacacagacaaaggct
caaaatgagagagcagacaacactgttcttcgcgtaaataatgaaagaattcaatgtgaa
aactttgcattccgagaggccctaaagaatgtgatttgcccaacttgtggtggtccaccg
tttggtgaagaagagaggcagctttgtttgcagaaacttcagctggagaatgctcaattg
agagaagagcatgataaggtagccagccttctttccaagtatattgggaaaccaatctca
catattgattcgttggcatccgctgctggatcctcatttgatttctcaccaggaagttcc
atgaaccaagggatgggaagccctccccttagtctcaatcctaccaatcctgcagttgct
aataatgctgcattagcttatcaattaaaagaaatccctgaaatggaaaagacacacatg
gcagatactgctgcccgtgccatagaagaactgctcaaaagttttgagatcaatgagccc
ttgtggatcaaatcgccgggtgatgggagatatctcctcaaccgtgacagctatgataag
atatttccaaggccgaaccacttcaagagctccagtgctcgtgtcgagtcttcaaaagat
tcaggagtagtgtccgttagtgcagtgcaattggttgacatttttttagactccagtaaa
tgggaagatctcttccctacaattatcacaaacgctaagacgattcaagtacttgaaagt
ggaatggtgggaaaccagagtggccgcctgcagctgatgtatgaacaaatgcacattctc
tcaccgttggtgctgtcgcgggacttctactttcttcgccattgtcagcagattgaaata
ggcacttgggtgattgtggatgtatcgtatgatttccccaaagagacttctgcatgtcaa
actcgatcatggagacttccttccggatgcatgatcaaagacatgcaaaacggatgttcc
aaagtgacctggatcgagcatgttgaagtagacgacaagacacaaactcatcggctctat
agagatctcatatgtagcaatgttgcgtacggcgctgaaagatggattgttactcttcag
aggatgtgtgagagatttgattactcaatggacgaggttgcacctagttgtgagtttgga
ggagtgattactacgcccgaagggaggaggagcacaatgaagctttcccacaggatggtc
aagaacttctgtggaatgttgagcatggcaggtaaacttgattttcctcaattatcagaa
gtgcacaacagcggggttcgagtctctgttcgtaaaaacacagaaccaggacagcccaac
ggcatggttgtcagtgttgctacttctctttggcttcctctgccgtctcataatgtcttc
aacttcttcagagatgaggaaacaagacttcagtgggatgttctctgtaatggaaatccg
gtgcacgaggtgactcgcatttcaactggaactcatcccggaaactgtatatccatcatt
cggcctttcatccctacagagaataacatggtgatgcttcaagagagctacatagactct
ctgggggccttggttatatatgctccagttgacataccagcactcaatatagcagtatgt
ggtgaggattcttccaagatacccatacttccatcggggttcgtaatctctggcgacggc
catcccgaaactgggcctgctgcaagcaatggtaggtcaggtggttcacttcttacagtg
gctttccagatactggtttcctgccccgcatcttcaaagcagctcaacatggagtcagtg
gcaactgttaatactcttatcagttccaccgttcaaaaaatcaaggctgctctaaactgc
tccggcttggattaa
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