Prunus mume (Japanese apricot): 103327599
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Entry
103327599 CDS
T03196
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X2
KO
K14301
nuclear pore complex protein Nup107
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103327599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103327599
03036 Chromosome and associated proteins [BR:
pmum03036
]
103327599
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103327599
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103327599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF1570
Motif
Other DBs
NCBI-GeneID:
103327599
NCBI-ProteinID:
XP_008228159
LinkDB
All DBs
Position
LG4:complement(2594604..2606093)
Genome browser
AA seq
1083 aa
AA seq
DB search
MDVEMDTSPSFFDPEDLSTREKFRRYGKRHLGSNISPHQENSASKFSESRLLYDGQSIHS
PTNAALLLENIKQEVESIDPYHLEGTPGKTPVSKRRSPIDGTEVDVGAGSGLVHHSIKLL
KQEEDSLADDGDTTFALFASLLDSALQGLMSFPDLILRFEGSCRDVSESIRYGSNIRHRI
VEDKLMRQKAQLLLDEAASWSLLWYLFGKGTEEIPKELILLPSTSHLEACQFVAEDHTAQ
LCLRIVQWLEGLASKALDLERKVRGSHVGACLPSSGIWYHTQCYLKKGASSTNTIHHLDF
DAPTREHAQQLPDDKKQDESLLEDVWTLLRAGRLEEACHLCRSAGQPWRAATLCVFGGLD
QFPSIEALVKNGKDRTLQAIELESGIGHQWHLWKWASYCASEKIAEQDAGKFESAVYAAQ
CSNLKRMLPICTDWESACWAMAKSWLDVQLDLELVHLEPGRLDQFKSIGDAIDGSPGHSD
GAVQPSNGPGIWPLQVLNQQPRQLSDLLQKLHSGEMVHESVTRGCKEQQRQIEMILMLGD
IARLLDLIWSWIAPSEDDQNVFRPHGDPQMIRFGAHLVLVLRYLLGDEMDAFREKIMNVG
DLIVHMYAMFLFSKQHEELVGIYASQLARHRCIDLFVHMMELRLNSSVHVKYKIFLSAME
YLQFSPVDNSKGSFEDIVERVLSRSREIKVGKYDKLSDVAEQHRLQSLPKAMVIQWLCFT
PPSTITNVEDVSTKLLLRALMHSNILFREFALVSMWRVPAMPIGAHTLLSFLAEPLKQLS
ESSDSLEDYNVSQNLEEFHDWSEYYSCDAKYRNWLKIELENAEVSPLELSMEEKQRAILA
AKETLNSSLSLLLRKENPWLAPGEDHVYESVEPIFLELHATAMLCLRSGECLPPDATVCA
TLMSALYSSVSEQDVLNRQLMINVSISSKDNYCVEVVLRCLAVAGDGLGQQEHNDGGILS
TVMAAGFKGELLRFQSGVTMEISRLDAWYSSKGGSLESPATYIVLGLCRRCCIPEVILRC
MEVSLSLIELGMPPEGHDQLIDLVASSEAGVLHLFSHQQLQEFLLVEREYSIRQMELEEE
LSS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgaaatggatacttctcccagcttcttcgaccctgaagacctctcaaccaga
gagaaatttcgtcgatacgggaaaaggcacttgggttcaaacatatctccgcaccaagag
aattcagcttcaaaatttagtgaatctaggctactctatgatggccagagtatacatagc
ccgaccaatgctgcacttcttctagaaaatattaagcaagaggttgaaagcattgatcct
tatcacttggaaggaactcctggaaagactcctgtctcaaaaaggaggtcgcccattgat
gggacagaggtggatgttggtgccggttctggtttagtccaccattcaataaaattgctc
aagcaggaggaggactcactggctgatgatggagatacaacctttgctttatttgcttct
ctacttgattctgctcttcaagggttgatgtcttttcctgacttgatactaaggtttgaa
ggatcctgccgagacgtttcagagtcaattaggtatggttccaacatacggcatcgtata
gtagaggacaagttgatgaggcagaaggctcagctccttctcgatgaggctgcttcatgg
tcgctgctgtggtacctttttgggaaagggactgaagagattcctaaagagctcatcctg
ttgccctcaacatcacacttggaggcttgccaattcgtcgcagaggaccatacggcacaa
ttatgtctacggattgttcaatggctggaaggcttagcctccaaagcacttgacttggaa
agaaaggtgcgagggtctcatgttggtgcctgtctcccaagctctggaatttggtaccat
actcagtgctatcttaagaaaggagcatccagtacaaatacgattcatcacttggatttt
gatgctccaacacgtgaacatgctcaacaattacctgatgacaaaaaacaagatgaatct
cttttggaagatgtctggactcttttaagagctggaagactggaagaggcatgtcacctt
tgccgatctgcaggacagccatggagagctgcaactttgtgcgtatttggaggacttgat
cagtttccttcaattgaagccctggtgaaaaatggaaaggatagaactttgcaagccatt
gagttggaaagtggcattggccaccaatggcatctgtggaagtgggcttcttattgtgca
tcagagaaaatagcagagcaagatgctggtaaatttgaatcagcagtctatgcagcacaa
tgtagcaatttaaagcgcatgcttccaatctgtactgactgggagtcagcatgctgggca
atggcaaagtcatggctagatgttcagttggatttggaattggttcatttagaaccagga
aggttggatcaatttaaaagcattggagatgcaattgatggaagtcctggacatagtgat
ggagctgttcagccttcaaatggaccgggaatttggccactccaagttttgaaccagcaa
ccacgacaactttctgatcttcttcagaaacttcattcaggggaaatggtccatgaaagt
gttactcgaggatgcaaggagcagcaacgccaaattgagatgattctaatgttaggggat
attgcacgattgctagaccttatatggtcatggatagcaccttcagaagatgatcagaat
gtcttcaggcctcatggagatcctcagatgattcgatttggtgctcatctagtgcttgtg
ctcagatacttacttggtgatgaaatggatgctttcagagagaaaattatgaatgttggt
gatctcattgtacacatgtatgccatgtttttgttttccaagcaacatgaggagttggtg
ggtatatatgcttctcaacttgcacgccaccgatgcattgacctctttgtgcacatgatg
gaactgaggctgaacagcagtgtgcatgtcaaatataagatcttcctttctgctatggag
tatttacaattttcccctgtggacaactcgaaaggaagttttgaagacattgttgagagg
gttttgtcaagatctcgggaaatcaaagttggtaagtatgataagctatcagatgttgca
gagcagcaccggctgcagagccttccgaaagctatggttatccagtggctctgcttcaca
cccccctccacaattactaatgttgaggatgtcagtacaaaacttcttctgagagctttg
atgcacagcaacatattgttccgggagtttgccctggtttcaatgtggagagttcctgca
atgcccattggtgctcacacattacttagttttcttgctgaacctttgaagcaactttca
gaatcttctgatagcttggaggattacaacgtttctcagaacctggaagagttccacgat
tggagtgagtattattcttgtgatgcaaaatatcgcaattggctcaaaattgaattagag
aatgcagaggtttctccacttgaactctcaatggaggaaaaacaaagggctattttagca
gccaaggagactctgaattcgtctttgtcattgttattgagaaaagaaaatccttggtta
gctcctggtgaagatcatgtgtacgaatctgtggaacctatatttcttgaattgcatgcc
actgcaatgctttgcttgcgttccggtgaatgcttgcctccagatgcaactgtgtgcgct
actttaatgagtgctctttactcttcagtgagcgagcaagatgtgttaaatcggcaacta
atgataaatgtctccatatcctcaaaggacaattactgcgtagaggttgtgcttcgctgc
ttggcagttgcaggtgatggtcttgggcaacaggaacacaatgatggtggtattcttagt
actgttatggctgctggcttcaaaggtgagctgcttcgatttcaatctggagtcacaatg
gagatttcccgattagatgcctggtattcgagcaaaggtggttccttagagagcccagca
acatacattgtgctgggcctttgtcgtaggtgctgtattccagaagtcattcttcggtgc
atggaggtctctctttcacttatagagttgggtatgccacctgaaggtcatgatcagttg
attgacttagttgcttcgtccgaggctggggttcttcatttgtttagtcaccaacaattg
caggaatttttattggttgagagggaatactccataaggcaaatggagcttgaagaggag
ctttcttcttga
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