KEGG   Prunus mume (Japanese apricot): 103327612
Entry
103327612         CDS       T03196                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103327612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103327612
Spliceosome [BR:pmum03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103327612
 Complex B
    103327612
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 103327612
NCBI-ProteinID: XP_008228178
LinkDB
Position
LG1:8162667..8164601
AA seq 299 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP
GVDAQGQPIDPRQIQRHFEEFYEDLFQELSKYGDIESLNVCDNLADHMVGNVYVQFREEE
HASNALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL
RHELFGSYRRRHSHSRSRSRSPYRHRSYEERSHGSRGHSRRYDDEDRYPESWSRRNKTVS
PGGRRGRSRSRSPDGRRGRSRSRSPGRRRHRSPVREGSEERRASSNSNLRRKEGMNTDI
NT seq 900 nt   +upstreamnt  +downstreamnt
atggctgagcatttggcttccatatttgggacagagaaggacagggtgaactgccctttc
tactttaagataggggcgtgcaggcatggagatcgctgctccagactccacaccaagccc
agcgtcagcccaaccctcttgctctccaacatgtaccagaggcctgatatgatcactccc
ggcgtcgacgctcagggccagcccatcgacccccgccagatccaaagacactttgaggaa
ttttatgaggatctgtttcaagagctgagtaagtacggtgatatcgaaagtctgaatgtc
tgtgacaacctagccgaccacatggtgggcaatgtgtacgttcagtttagggaggaggaa
catgcttcaaatgcacttcggaacctaagtggaagattttatgctggtcgtcctatcatt
gttgacttttcaccagtgacggacttccgtgaagccacctgcaggcagtatgaggagaat
acatgcaaccgtggtggatactgcaattttatgcacttgaaaaggatcagcagggaattg
aggcatgagttatttgggagctatcggagaaggcatagccacagtcgaagcaggagtcga
agcccttacaggcatcgtagctatgaagagcgctctcatgggagccgtggtcatagcaga
aggtatgatgatgaggatcgctatcctgaaagctggagccgaaggaacaagactgttagc
cctggtggaaggagaggacgcagtagaagcagaagccctgatggaaggagagggcgcagt
agaagcagaagccctggaaggagaagacaccgtagtccagttagagaaggcagtgaggag
agacgggccagcagcaatagcaacctgcggagaaaggagggtatgaatactgatatttga

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