KEGG   Prunus mume (Japanese apricot): 103327690
Entry
103327690         CDS       T03196                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103327690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103327690
   03041 Spliceosome [BR:pmum03041]
    103327690
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103327690
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103327690
Spliceosome [BR:pmum03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103327690
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 103327690
NCBI-ProteinID: XP_008228275
LinkDB
Position
LG4:3312253..3315425
AA seq 391 aa
MEDFHERSRFDDNQIAYNGNEEFEQPPEQQYEEIEQPPEQQFDSGRGFETNHNVDSEGNE
FRDSFNHRDSAAGKLFVGGVSWETTEEAFTNYFSKYGEIADSVIMIDKHSGRPRGFGFVT
FADPGVVDSVLEEEHVIDGRVVEVKRTVPREDMGFKGISKRKKIFVGGIPTSLTDDELGE
YFSTYGSIVEHQIMVDHKTGRSRGFGFVTFENEDALDKVFSEGKIHELGGKQVEIKKAEP
KRGGGDFSGSAPKSYGGLGGAAAGYGAYNSASRYNGKMGRGYGGGGYPTYGTYNNYAGNY
AGSYAGFYGGYGGYGYGFGYGGPMYGNAGYAASGYGMPAGYGGNTAYGGGRGYGNGAVGR
GGGSGGGSYGSGRGYDRNGGSTTGRYHPYQK
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggaagattttcatgaacgcagtcgtttcgacgacaaccaaatcgcttacaatggaaac
gaagaatttgaacaaccaccagagcaacaatatgaagaaattgaacaaccaccagagcaa
caatttgattcggggcgtggttttgaaacgaaccataacgtagatagtgaaggcaatgag
tttagggattcattcaatcatcgtgattcggctgcgggaaaactatttgtaggaggcgtt
tcttgggagacgactgaagaggcctttaccaattacttcagcaagtatggagaaatagca
gattctgttataatgattgataaacattctgggaggccaagggggtttgggtttgtaaca
tttgctgatccaggggttgttgattcggttttggaggaagaacatgtcatagatggcaga
gtggtggaggtgaagaggacagttccgagggaggatatggggtttaaggggatatcgaaa
agaaagaagatttttgttggtggaataccaacgtctttgactgatgatgagttgggggaa
tatttctctacatatggtagcattgttgagcaccagattatggtagatcataaaactggg
aggtctagagggtttgggtttgtcacttttgagaatgaagatgctcttgacaaggtattt
tctgagggcaagatacatgaacttggaggcaaacaggtggaaataaaaaaggctgaacct
aaaaggggtggtggtgatttcagtggcagtgctcccaagtcatatggtggcttaggtggt
gctgcagctggatatggtgcatataattctgcaagtcggtacaatggaaaaatgggcagg
ggctatggtgggggtgggtatcccacctatggtacttacaacaactatgctggaaactat
gctggaagctatgcgggtttctacggtggctatggtggatatggatatggatttgggtat
ggtggacccatgtacggcaatgctggatatgcagccagtggatatggcatgcctgctggt
tatggtgggaatactgcctatggtggtggtagagggtatggaaatggtgctgttggccgt
ggtggtggtagcggtggtggaagttatggttctggtagaggatatgatcggaatggtggt
tctacgaccggaagatatcatccttatcaaaagtga

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