KEGG   Prunus mume (Japanese apricot): 103327813
Entry
103327813         CDS       T03196                                 
Name
(RefSeq) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103327813
DNA repair and recombination proteins [BR:pmum03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     103327813
SSDB
Motif
Pfam: AAA_25 ATPase ChlI DnaB_C Rubredoxin_2 AAA AAA_22 AAA_16 NACHT Lon_C AAA_19 AAA_24 AAA_5 AAA_14 NTPase_1 SLFN-g3_helicase AAA_18 KTI12 CbiA nSTAND3 MCR DUF5427
Other DBs
NCBI-GeneID: 103327813
NCBI-ProteinID: XP_008228399
LinkDB
Position
LG4:3791467..3800231
AA seq 645 aa
MPVSDMRALRAIYTHKLLNPTTHKSLSKPSLSHLQSLQNPNFARHFHSTCRLRRPEEPST
VTDSLKTETNSSSSGEIRRVWSVFGPASHTLVTPRVANKSSDVQEPRRESESESESENET
QKGLSSLRNGVEESERDKTHRNVKKANSGTGNYREMTRSNKKGGKVKTCWVCSSCGETYG
QWWGACRSCHAMGTVKRFSESVEDADGGKVSGFQVSEKAVRSWMGKEAGEGGPMRLADVN
QGMTVIDRRIPLPGIFGSEVERVLGGGLVRGSLVLVGGDPGVGKSTLVLQMASLIAEGHE
LGKAAPVVYVSGEESVQQIGSRADRMKIETEDLFLYSSTDIEDILEKIQSLNPQALIIDS
IQTVYLQGVAGSAGGIMQVKECTQALLRFAKKTNVPVLLIGHVTKSGDIAGPRVLEHIVD
VVLYMEGEKSSAHRLLRSVKNRFGSTDELGVFEMSQSGLQAVSNPSEMFLSEQYSDSEYL
AGLAVAVIMDGSRTFLIEIQALCVSESPSARQVNGVPPSRASMIISVLAKQAGLKLQENA
IFLNVVSGVFLKDTAGDLAIAAAICSSFLEFPIPNSIAFIGEIGLGGELRQVPQMDKRIH
TLAKLGYKKCIVPNSAKTSQGTPGFEDIKIIGCKDLKEVISNVFK
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgccagtatcagacatgagagctctcagagccatttacacccacaaactccttaatccc
accactcacaaatccctctccaagccatctctcagccacttacagtccctccaaaaccct
aacttcgcccgccattttcactccacatgccgtctccgacgccccgaagaaccgagcact
gtcaccgattctctgaaaaccgagacaaattcaagctccagtggagaaattcgtcgcgtt
tggtctgtttttggccctgcctcgcacacattggtgaccccaagagtcgcaaacaaaagt
agtgatgtacaagaaccaagacgtgaaagtgaaagtgaaagtgaaagcgagaatgaaacc
caaaagggcttatcgagtttgagaaatggggtcgaggagtctgagagggataagactcat
aggaatgtgaagaaggccaattcaggaactgggaattatagggaaatgacgaggagtaat
aagaagggggggaaggtcaaaacttgctgggtttgctcgagttgtggggagacatatggg
cagtggtggggtgcttgccggtcttgtcatgcaatgggcacggtgaagaggttttcggag
agtgttgaagatgctgatgggggtaaggttagtgggtttcaggtttcggagaaggcggtg
cggtcatggatggggaaggaggccggggagggtgggccaatgcggttggctgatgtgaac
cagggaatgactgtgatagacaggcgcattcctctgcctggaatctttggaagtgaagtt
gaaagagtgcttggtggtggtcttgtacgaggttcattggttttggtcggtggtgatcct
ggtgttggcaagagtacactcgtgttgcagatggcttcactaatagctgaagggcatgag
cttggtaaagcagcccctgttgtgtatgtctccggtgaagagagtgttcagcaaattgga
agcagagctgaccgtatgaagattgaaacagaggatcttttcttgtactcaagcactgat
attgaggatatattagagaaaattcagtctctcaaccctcaggcgttaatcattgattca
attcaaacagtttatttacaaggagttgctggaagtgctggagggatcatgcaggtgaaa
gaatgcacacaagccttgctacgttttgcaaagaagactaacgtccctgttcttttgatt
gggcacgtaacaaaatctggagatattgctggacctcgtgtcttggagcatattgttgat
gtcgtgctatatatggaaggggaaaagagttcagcccatcgtttacttcgatctgtgaag
aatcgttttggatcaactgatgagcttggagtatttgaaatgtcacaatcaggactgcaa
gctgtttcaaaccccagtgagatgtttctgtctgagcaatactcagattcagagtattta
gctggtttagccgttgctgtaataatggatggatctcgtacttttctcattgagattcag
gcattatgtgtatccgaatcaccaagcgcccggcaagttaatggggttccaccaagtaga
gcttccatgattatttctgtacttgcaaagcaagctggtctaaagctccaggagaatgcc
atcttcttaaatgttgttagtggggtattcctgaaagacactgctggggatcttgcaata
gcagcagcaatttgcagcagtttcttggagttccctattcccaatagtattgcattcatt
ggtgaaattggacttggtggtgaacttcgccaggttcctcaaatggataaaaggatacac
acactggcaaaactgggttacaaaaagtgtattgtaccaaattcagccaagacatctcaa
ggaactccaggctttgaggatatcaaaatcataggctgcaaggatctgaaagaggtcatc
agcaatgtgttcaaatga

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