Prunus mume (Japanese apricot): 103327813
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Entry
103327813 CDS
T03196
Name
(RefSeq) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103327813
DNA repair and recombination proteins [BR:
pmum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
103327813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
AAA
AAA_22
AAA_16
NACHT
Lon_C
AAA_19
AAA_24
AAA_5
SLFN-g3_helicase
NTPase_1
AAA_14
zf-Tbcl_FmdE
KTI12
CbiA
nSTAND3
MCR
DUF5427
Motif
Other DBs
NCBI-GeneID:
103327813
NCBI-ProteinID:
XP_008228399
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Position
LG4:3791467..3800231
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AA seq
645 aa
AA seq
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MPVSDMRALRAIYTHKLLNPTTHKSLSKPSLSHLQSLQNPNFARHFHSTCRLRRPEEPST
VTDSLKTETNSSSSGEIRRVWSVFGPASHTLVTPRVANKSSDVQEPRRESESESESENET
QKGLSSLRNGVEESERDKTHRNVKKANSGTGNYREMTRSNKKGGKVKTCWVCSSCGETYG
QWWGACRSCHAMGTVKRFSESVEDADGGKVSGFQVSEKAVRSWMGKEAGEGGPMRLADVN
QGMTVIDRRIPLPGIFGSEVERVLGGGLVRGSLVLVGGDPGVGKSTLVLQMASLIAEGHE
LGKAAPVVYVSGEESVQQIGSRADRMKIETEDLFLYSSTDIEDILEKIQSLNPQALIIDS
IQTVYLQGVAGSAGGIMQVKECTQALLRFAKKTNVPVLLIGHVTKSGDIAGPRVLEHIVD
VVLYMEGEKSSAHRLLRSVKNRFGSTDELGVFEMSQSGLQAVSNPSEMFLSEQYSDSEYL
AGLAVAVIMDGSRTFLIEIQALCVSESPSARQVNGVPPSRASMIISVLAKQAGLKLQENA
IFLNVVSGVFLKDTAGDLAIAAAICSSFLEFPIPNSIAFIGEIGLGGELRQVPQMDKRIH
TLAKLGYKKCIVPNSAKTSQGTPGFEDIKIIGCKDLKEVISNVFK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccagtatcagacatgagagctctcagagccatttacacccacaaactccttaatccc
accactcacaaatccctctccaagccatctctcagccacttacagtccctccaaaaccct
aacttcgcccgccattttcactccacatgccgtctccgacgccccgaagaaccgagcact
gtcaccgattctctgaaaaccgagacaaattcaagctccagtggagaaattcgtcgcgtt
tggtctgtttttggccctgcctcgcacacattggtgaccccaagagtcgcaaacaaaagt
agtgatgtacaagaaccaagacgtgaaagtgaaagtgaaagtgaaagcgagaatgaaacc
caaaagggcttatcgagtttgagaaatggggtcgaggagtctgagagggataagactcat
aggaatgtgaagaaggccaattcaggaactgggaattatagggaaatgacgaggagtaat
aagaagggggggaaggtcaaaacttgctgggtttgctcgagttgtggggagacatatggg
cagtggtggggtgcttgccggtcttgtcatgcaatgggcacggtgaagaggttttcggag
agtgttgaagatgctgatgggggtaaggttagtgggtttcaggtttcggagaaggcggtg
cggtcatggatggggaaggaggccggggagggtgggccaatgcggttggctgatgtgaac
cagggaatgactgtgatagacaggcgcattcctctgcctggaatctttggaagtgaagtt
gaaagagtgcttggtggtggtcttgtacgaggttcattggttttggtcggtggtgatcct
ggtgttggcaagagtacactcgtgttgcagatggcttcactaatagctgaagggcatgag
cttggtaaagcagcccctgttgtgtatgtctccggtgaagagagtgttcagcaaattgga
agcagagctgaccgtatgaagattgaaacagaggatcttttcttgtactcaagcactgat
attgaggatatattagagaaaattcagtctctcaaccctcaggcgttaatcattgattca
attcaaacagtttatttacaaggagttgctggaagtgctggagggatcatgcaggtgaaa
gaatgcacacaagccttgctacgttttgcaaagaagactaacgtccctgttcttttgatt
gggcacgtaacaaaatctggagatattgctggacctcgtgtcttggagcatattgttgat
gtcgtgctatatatggaaggggaaaagagttcagcccatcgtttacttcgatctgtgaag
aatcgttttggatcaactgatgagcttggagtatttgaaatgtcacaatcaggactgcaa
gctgtttcaaaccccagtgagatgtttctgtctgagcaatactcagattcagagtattta
gctggtttagccgttgctgtaataatggatggatctcgtacttttctcattgagattcag
gcattatgtgtatccgaatcaccaagcgcccggcaagttaatggggttccaccaagtaga
gcttccatgattatttctgtacttgcaaagcaagctggtctaaagctccaggagaatgcc
atcttcttaaatgttgttagtggggtattcctgaaagacactgctggggatcttgcaata
gcagcagcaatttgcagcagtttcttggagttccctattcccaatagtattgcattcatt
ggtgaaattggacttggtggtgaacttcgccaggttcctcaaatggataaaaggatacac
acactggcaaaactgggttacaaaaagtgtattgtaccaaattcagccaagacatctcaa
ggaactccaggctttgaggatatcaaaatcataggctgcaaggatctgaaagaggtcatc
agcaatgtgttcaaatga
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