KEGG   Prunus mume (Japanese apricot): 103327834
Entry
103327834         CDS       T03196                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmum03036]
    103327834
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103327834
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103327834
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103327834
SSDB
Motif
Pfam: MMS19_N MMS19_C ATG22 HEAT_EZ
Other DBs
NCBI-GeneID: 103327834
NCBI-ProteinID: XP_008228424
LinkDB
Position
LG4:3968934..3980095
AA seq 1159 aa
MAETTELIRHIELYVDTSRSPTEQAASLNSIISLVKSDFLTIEVLVKEMRMYLTTTDNVI
RARGILLLAEVLTGLASKPLDNATIHSLIGFFTDRLADWRALRGALVGCLALLRRKVNAG
MVSASDAKLVAQSYIESLQVQSLGQHDRKLCFELLECLLERHPNEIASLGETFFYGICQA
MDGEKDPHCLMLTFPIVETLVRIYPDPSGSLASFCGDLFELLGSYFPIHFTHLKDEDAEV
KRDDLSKALMSAFSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAK
HAGAIWISLKDAISNSLEKPAMSFTSEPLYGLGFQENEIATEALMLLQKVTLQNEALFLS
LIIQDEGINIVFNSIASHEHYNNIPLQGKQWLHAVGRILYIISKTSMASCNSVFESFFPR
LMNTLEISVTNSSGDCTLNENSFPSKKYNFGALYLCVELIAACRDLIMRLKDLAPKPDTP
QETCRYMLQSFADSLVNAFSSSLATNANEVAHGADIYFKVKGLQILATFPGDFLPISKFL
FANILTILMSIILVDFNKILLWKLVLKALVHIGSFVDMYHESEKALCYMGAVVDKTVSLV
SRDDFNMPFSLKLEAVSEIGASGRNHMLKIVHGMEEAIVAKLSDYVHGNLKSAEKTIQLL
ECYCNKILSWINETGGLEEVLLRFVINIWSCVESCKDFSIQVQEEELLDATMMAMKLAIG
SCSEESQNIIIHKAYSVISSSISIPFKDSLDATSSIQLEELRVSEQIDKSSHRDDQIDKF
SRRDEWILSLFASVIIAVRPKAQIVNVKGILHLFMTTVLKGCVPAAQASGSVINKLGTKS
NETANSNDCTLEEAVDMIFSTKLWNLNENGVLQTCGSGNGSKVGLTDLCLGFSSNKLLQV
HAIVGLAWIGKGLLLLGHEKVKDVTKILLECLLSEGRICAVELKQGLLENSYEQHSVTRS
AADAFHIIMSDSEVCLNRKFHAIARPLYKQRFFSTVMPILQSWIIKSDSSVCRSMLFRAS
AHLISNAPLIVILSEAKKLMPVLLDGLSLLSEDILDKDKLYSLLLVLSGILTDKNGQVAV
IENAHILVNCLTRLVDYPHMMLVRETALQCLLATSELPYARIFPMRTQVLQAICKALDDP
KRAVRQEAVRCRRAWASIA
NT seq 3480 nt   +upstreamnt  +downstreamnt
atggccgaaaccaccgaattgattcggcacattgagttgtacgtcgacacgtctcgctct
cctaccgagcaggctgcaagcttgaattcaatcatttctctcgtgaagagtgacttttta
accattgaagtgctggtgaaagagatgaggatgtatttgaccactacggataatgtgatc
cgtgctcggggtatacttcttctggcagaagttcttacaggtcttgcatcaaagccacta
gataatgcaactattcatagtttgataggattcttcacagacagactggcagattggaga
gctttacgtggtgcacttgtcggttgcttggcactgctgaggaggaaagttaatgctgga
atggtctcggccagtgacgcaaaactggttgcccagtcttacatagagtccctacaggtg
caatctttagggcagcatgacagaaagctttgctttgagcttttggaatgccttttagag
cgccatccgaatgagattgcttcactgggtgaaacctttttttatgggatctgtcaagct
atggatggagaaaaggatcctcattgcttaatgttaacatttcctattgttgagactctg
gtgcgaatatatccagacccatctggctcacttgcaagtttttgtggagatctatttgaa
ctgttgggatcttactttcccattcattttactcatctcaaagatgaggatgctgaggtg
aaaagggatgacctttcaaaggcactaatgtcagcattctcgtccacgcctttattcgaa
ccatttgtcattccattgcttcttgagaaactttcttcgtctctgccattagcaaaggtt
gattctttgaagtatcttaaccactgcacagctaaatatggagctgacagaatggcaaaa
catgctggagctatttggatttcactgaaagatgcaataagtaattcattggaaaagcct
gctatgtcctttacttcagaaccactatatggtcttggctttcaagagaatgaaattgca
acagaagctctaatgcttctacagaaggttaccctgcaaaatgaggctttgtttttaagt
ttgattattcaggatgaaggtataaacatagttttcaactccatagccagtcatgaacat
tataataatattcccttgcaaggcaagcagtggttacatgccgttggtcgcatcctttat
ataatttccaagacttccatggcttcctgtaacagtgtgtttgaaagtttcttcccccgc
ctaatgaatactctcgagatttctgtgacaaattcctctggggattgcactcttaatgag
aattcttttccctcaaaaaagtataattttggagctctttatctctgcgtggaattaatt
gcggcatgcagagatttaattatgagattgaaagaccttgctccgaagcctgatactcca
caggagacatgtcgctacatgcttcagagcttcgcggattcactagtcaatgccttttct
tcttccttggccacaaatgctaacgaagttgctcatggtgcagatatttatttcaaagtg
aagggtttacagattctggctacattccctggagatttcttgccaatatctaaatttttg
tttgcgaatattctgacgatactcatgtcaatcatcttagtggatttcaacaagatattg
ctatggaaactagtgttgaaagctttagtccacattgggtcattcgttgatatgtatcat
gagtctgagaaggcactgtgctatatgggtgctgttgttgacaagactgtttcattggtg
tctcgtgatgattttaatatgcctttttcactaaaactggaggcggtctctgagattggt
gcaagtgggcgaaatcatatgctaaaaattgtacacgggatggaagaggcaatagtggcc
aagttatctgattatgtccatggaaatttgaagtcagctgaaaaaacaattcaactgttg
gaatgctactgtaataagattctttcatggatcaatgaaacaggaggtctcgaggaagtt
ctgttgcggtttgtcattaatatatggagttgcgttgagagttgcaaagattttagcatt
caagtccaggaagaagaactacttgatgcaaccatgatggcaatgaagcttgccattggg
agttgttcagaagaaagccagaacattataatccacaaggcttacagtgttatttcatca
agcatatccattccatttaaggattccctggatgccacctcttccattcagcttgaagaa
ttgcgcgtttctgaacagatagacaaatcttctcatagggatgaccagatagataaattt
tctcgtagagatgaatggattctttcactttttgcatcagtaatcatagcggtgcgtcca
aaagcgcagattgtgaatgtaaaaggaattttgcatttgtttatgacaaccgttcttaaa
ggttgtgttccagcagctcaggcttcgggttctgtgatcaacaaattgggtacaaaatcc
aatgaaacagcaaattcaaatgactgtaccttagaagaagcagtggatatgatttttagt
acaaaattatggaatctcaatgaaaatggagttttacagacatgtggatcaggtaatggc
agtaaagttggtcttactgatttatgccttggcttttcgagcaataaactgcttcaagtc
catgccattgttggactagcatggatagggaaaggtttgcttctacttggtcatgaaaaa
gtaaaagatgtaaccaaaattttgttggagtgcttactgtctgaaggcagaatatgtgcc
gtggagttgaagcaaggtttgttagaaaacagttacgagcagcactctgtgacgagaagt
gcagcagatgcatttcacattattatgagtgattctgaagtttgtttgaatcgaaaattt
catgccatagcacgaccactatacaagcagcggtttttctctacagtgatgcctattctg
cagtcttggataataaaatctgattcatcagtatgcagatctatgctgtttcgggcatct
gcgcaccttatatctaatgctccattaattgttatcttgagtgaagccaagaagcttatg
ccagtactgttggatggattgtccctgcttagtgaagatattctggataaagataagcta
tatagtcttctgctagtcctttctggaatattgacggataaaaatggacaagtggctgtc
atagagaatgcacacattttagttaattgcctcaccagacttgttgactacccacatatg
atgcttgtcagagagactgcacttcaatgtcttcttgcaacatctgagctgccatatgca
agaatctttcccatgagaacacaggtactacaagcaatatgtaaggctcttgatgatcca
aagagggctgttcgtcaggaagctgttaggtgtaggcgagcatgggcatcaattgcgtaa

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