Prunus mume (Japanese apricot): 103327938
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Entry
103327938 CDS
T03196
Name
(RefSeq) probable ATP-dependent DNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103327938
Enzymes [BR:
pmum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103327938
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
103327938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_11
T2SSE
Motif
Other DBs
NCBI-GeneID:
103327938
NCBI-ProteinID:
XP_008228535
LinkDB
All DBs
Position
LG4:complement(4685184..4690676)
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AA seq
899 aa
AA seq
DB search
MEEKKEKGEEAPNFPAFPYKPYAIQIDFMNALYHSLNKGGLSMLESPTGTGKTLSIICSA
LQWVVDRRQQQKTEDRIESDRNGAKDGQVDSDDEPDWMRNAVINKDKQSEEMKNKMKEKF
GIGFRRKEGNNLQMSNGAVELSDEDFLVEDYESEEEGNLGGGKSKRKVAGVSLSSSEEDE
EYGSGDDEYEEGEKLQVYFCSRTHSQLSQFIKELKKTVFANEMKVVCLGSRRNFCINEDV
LKLGNSTRINERCLELQRNKNKEVSKIMNVGAGGRIRRNKASCGCPMLRKHKLQKEFRSM
MSQQGALDIEDLVHLGKSMRTCPYYGSRSMVTVADLVVLPYQSLLSKASRESLGLNLKNN
IVIIDEAHNLADSLISMYDSRITLSQLEDVHSHIEKYFERFCNVLGPGNRRYIQTLMVLT
RAFRQVFLKDDRSYGDSFRDTEKGSGASGMSTSSMAINDFLFSLNVDNINLVKLLQYIKE
SNIMHKVSGYGDKVASFQKNLALNGGEDGSTLSSFQALANLLLSLTNKDGDGRIIISRTS
TTCSREDGRYIKYVMLTGDKIFSEIVDQAHSVVLAGGTLQPIEETRERLFPWLPPGQLQF
FSCSHIVPPESILPVAVSRGPSGHTFDFSYSSRRSSIMIQELGQLLCNLVTVVPEGIVVF
FSSFDYEGQVYDAWEASGILERIKKKKRLFREPRKNTYVESVLKEYKETIDTLSSGERKE
NPSQSGAMLLAVVGGKISEGINLSDGMGRCIVMVGLPYASPSDIELMERVKYIEGLGDSD
STKTPNLSLGNELCSEEVHAGFNVLRSCRRRGKEYYENLCMKAVNQSIGRAIRHINDYAA
ILLVDTRYASDSSERNFCHPTSKLPQWIKDRFVASTDYGEVHRMLHQFFKHNKKRWLQQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaaaaagaaaaaggggaggaagccccaaactttccagcatttccgtacaag
ccctacgccatacagatcgatttcatgaacgccctctatcactctctcaacaaaggaggt
ctttccatgctcgaaagccccacagggactggaaaaactctcagtatcatttgtagtgct
ttgcaatgggtggttgataggaggcaacaacagaagactgaagataggattgaatctgat
cgtaatggtgcaaaagatggtcaagttgactcagatgatgaaccggattggatgagaaat
gctgtcattaacaaagacaagcagagtgaggagatgaagaataaaatgaaggagaagttt
gggattggatttcgaaggaaagagggaaacaatttgcaaatgagcaatggtgctgtggag
ttgagtgatgaagattttttggtggaagattatgaaagcgaagaggaagggaatctgggt
ggtgggaagtcaaagaggaaggttgctggggtttcccttagttcaagcgaggaagatgaa
gaatatgggtctggtgatgatgaatatgaggagggcgagaagctgcaggtttatttttgt
agccgaacacattcacagctttcacagttcataaaggagttaaagaagactgtttttgct
aatgagatgaaggtggtctgtttgggctctaggaggaacttctgcatcaacgaagatgta
ttgaaacttggaaactcaactcgcattaatgaacgctgtttggaacttcaaagaaacaag
aataaggaagtttccaaaatcatgaatgtgggtgcaggaggaaggattcgcaggaacaag
gcttcttgtggctgcccaatgcttagaaaacataaactacaaaaggaattcaggagcatg
atgtctcaacaaggtgccttggatattgaagatcttgttcatcttggaaaaagcatgagg
acttgtccatattatggctcccgaagcatggttactgttgctgatctggtggttctaccg
tatcaatctctactttcaaaagcatctcgcgagtcacttgggctcaatttaaagaataat
atcgttattatagatgaggctcacaatctagctgactccttaatcagcatgtatgactca
agaatcactttgtcgcagctggaggatgtgcacagccacatcgagaagtactttgaaaga
ttttgcaatgtattgggacctggtaatcgtagatatatccaaactctcatggtactcact
cgggctttccgccaagtgtttctcaaagatgatagaagttatggagattccttccgtgat
actgaaaagggttctggagcaagtgggatgtctacttcctctatggccattaatgatttt
ttattttccctcaatgtagacaacatcaacttggtcaaattgcttcagtatataaaggaa
agcaacatcatgcacaaggttagtgggtatggcgataaagtagctagctttcaaaaaaat
ttggcacttaatggcggtgaagacggaagcactctgtccagtttccaagctttagcaaat
ttgttgctatcactgacaaataaagatggtgatgggaggattatcatctcaaggactagt
acaacatgctctagagaggatggacgatatataaaatatgttatgctcactggggataag
attttttctgagattgtagatcaagcacattccgtggtactggctgggggaactctgcaa
cctatagaagaaacaagggagcgactcttcccttggttaccaccgggccagttgcaattc
ttttcatgtagtcatattgttcccccggagagcattttgccagttgcagtttcccgtggc
ccttctggtcacacttttgattttagctacagctccagaaggtcatcaatcatgatacag
gaactagggcaattgctttgtaatttggtgacagtggttcctgagggaattgttgtcttc
ttctcctcgtttgattatgaagggcaagtttatgatgcctgggaggcttcaggcatcctt
gaaaggattaagaagaagaagcgtctatttagagagcctagaaagaatacatatgtagaa
tctgttctcaaggaatacaaggaaacaattgatacattgtcttctggggagcggaaagaa
aatccttctcaaagtggtgcaatgcttcttgctgtcgttggtggtaagatatcagaaggc
atcaacttaagtgatgggatgggccggtgtatagtcatggttggactgccctatgctagc
ccttctgatattgagttaatggagagggtgaagtatattgaagggttgggagattcagat
tccactaagacaccaaatctttcacttggtaatgaactgtgcagtgaagaagtacatgca
gggtttaatgtcctcagaagttgcagacgcagaggaaaagaatattatgagaatctatgc
atgaaagctgttaatcagtccattggtagagcaatccggcatataaatgactatgcagca
attttactagtcgacacacggtacgcatctgattcctccgaacggaatttttgccatcca
actagcaagcttcctcagtggataaaggatcgcttcgttgcttcaactgattatggtgaa
gttcatagaatgttgcatcagttcttcaaacataacaagaagagatggttgcagcaataa
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