Prunus mume (Japanese apricot): 103327944
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Entry
103327944 CDS
T03196
Symbol
LOC103327944
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103327944 (LOC103327944)
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
103327944 (LOC103327944)
REST complex
103327944 (LOC103327944)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103327944 (LOC103327944)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3_corepress
PAH_ZNF598
TPPII_C
LLCFC1
Motif
Other DBs
NCBI-GeneID:
103327944
NCBI-ProteinID:
XP_088906218
LinkDB
All DBs
Position
LG4:11117974..11123448
Genome browser
AA seq
539 aa
AA seq
DB search
MHRMENKSIAEVYQEVAALFQDNSDLLVEFTHFLRDTSGAASIHYAPSHKNSMLSDRSSA
MPPMRQMHVDKKERTMGSYTDYDDDCSDPDRDRALMKADKEQRRRGEKEKERKEDGERRD
RERDDRDFDHDGSRDFNMQPFHHKWQDSHMTEDSANEQVHPGAQGDENFAEHFISSSYED
RNSAKSMYSQKLAYCDKVKEKLRNPDDYVEFLKYVHCFSKEIITRSELQSLVSDLLGRYP
DLMDAFDEFLACEKKEALRSEGNLSRSVKVEDMDRDHDCERDDGVNNRERGTWKGDTFEK
NGASGNKEVGGQKISIFSSKDKYLAKPINELDLSNCERCTPTHLLLPKNYPIPSASQKTE
LVSEVLNDPLASVTSGSEDYSSKHVRKNQYEESLFRCKDDRFDLDMLLDSMNVTTKCVEE
LLEKINNGMIKMDSPIRIDEHLTAVNLRCIEQLCGDHGRDVMDLLRKNGPLALSDILTCL
KQKQEEWARCRSDSNEVGADICDKNYPESQDTKSLSRKALLTETKEFSEKKRTENGQEQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaatggaaaacaagtccattgcagaggtttaccaggaggttgcagcacttttc
caagataactcagacttacttgtggagtttactcatttcttacgtgatacttcaggagca
gcctccattcactatgctccatctcataaaaactcaatgctcagtgataggagctctgct
atgcctcctatgcggcaaatgcatgttgacaagaaagaaaggactatgggttcttatacc
gactacgatgatgactgttctgatcctgaccgtgatagagctctgatgaaagctgacaaa
gagcaaaggaggcgtggtgagaaggagaaggagaggaaagaagacggagaaagaagagat
cgtgaacgggatgatagggattttgaccatgatggcagtagggacttcaacatgcaacct
tttcaccacaaatggcaagattctcatatgactgaagactcagctaatgaacaagtgcat
ccaggtgctcaaggcgatgaaaactttgcagaacatttcatttcatcctcttatgaggat
agaaattctgccaaaagtatgtacagccagaagcttgcttactgtgataaggtgaaggag
aagttacgaaatcctgatgattacgttgaatttttgaagtacgtccattgttttagcaag
gaaattattacacgatccgaattgcagtctttggtgagtgatttacttggaaggtatccg
gatcttatggatgcgttcgacgaatttttggcatgtgaaaaaaaagaagccttaaggagt
gaaggaaatttatccagatcagtgaaggtagaggatatggatagggatcatgattgtgaa
agggatgatggggttaacaatagagagcgtggaacttggaaaggggatacgtttgagaaa
aatggtgcctctggcaataaagaagttggaggccagaagatttctatattttccagcaag
gataaatacttggcaaaacctattaatgagcttgacctctctaactgtgagcgctgcact
ccaacccatctcctcctcccaaagaattatccaataccttctgctagccaaaaaacggag
cttgtgtctgaagtattgaatgatcctttggcatctgtcacttctggaagtgaggattac
tcttctaaacatgtgcgcaaaaaccagtatgaagagagcctgtttcggtgcaaggatgac
aggtttgacctggatatgttgttggattccatgaacgtaacgaccaagtgtgtggaagaa
ctattagaaaagatcaataacggtatgattaagatggacagtccaatccgtattgacgaa
cacttgacagctgtgaatctgaggtgcattgagcaactctgtggtgaccatgggcgtgat
gtgatggatttgttgagaaaaaatggtccactagctttgtctgatatattaacctgtttg
aagcaaaagcaagaagagtgggcaaggtgtcgttctgattctaatgaagttggggctgat
atatgtgacaagaactatcccgagtcacaggacacaaagagcttaagcagaaaagccttg
ctgacggagactaaagagttcagtgagaagaagcggactgaaaatggtcaggagcaatga
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integrated database retrieval system
