Prunus mume (Japanese apricot): 103327961
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Entry
103327961 CDS
T03196
Name
(RefSeq) golgin candidate 5
KO
K20286
TATA element modulatory factor
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103327961
Membrane trafficking [BR:
pmum04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103327961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Motif
Other DBs
NCBI-GeneID:
103327961
NCBI-ProteinID:
XP_008228564
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All DBs
Position
LG4:4858139..4866342
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AA seq
989 aa
AA seq
DB search
MAWFSGKVSLGNFPDLAGAVNKLQESVKNIEKNFDSALGFEEKEKAESGNEASGLWPSST
ERKLLFDPVMSFMGQTNEGSSVDSSQKAESSEHPPKVDKSSGESESPQKPSTVEAKEGVK
TETLQHSSTEQMADKEETEVVKEETDDKHAVTVEETKTLVAEPEKSESESSSLPVEPFEP
TAKNDGPSESVDSQDDNKISVVGPSVNPETLQGKSAAVEVDQVEEGHTVLLREAHDVDVH
ETVDEQRTQVEQNDGHMTQAGEIVETVAMVEGETPTDSQPGGLTEPSSLHSATTEEIHSG
RSSTNQPPGVNPSDDASDAVSESVSKEHNAIVEEPEVEQQADDNEADVQEQHLSSGENVS
DSSVIELEKVKMEMKMMEAALQGAARQAQAKADEIAKFMNENEQLKSAIEDLKRKSNDAE
VESLREEYHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGEEL
SKKQAAQEGQIRKLRAQIREFEEEKKGLITKLQVEENKVESIKRDKTATEKLLQETIEKH
QTELAAQKEYYTIALAVAKEAEAMAEARANSEARSELESRLRESEEREAMLVQALEELRQ
TLTRTEQQAVFREDMLRRDIEDLQRRYQASERRCEELITQVPESTRPLLRQIEAMQETTS
RRAEAWAAVERSLNSRLQEAEAKAAAAEEGERSVNERLSQTLSRINVLEAQISCLRAEQS
QLSKSLEKERQRAAENRQEYLAAKEEADTQEGRANQLEEEIRELRRKHKQELQDALMHRE
LLQQEVEKEKAARLDLERTSRARSTTVSDQSAITRHNSALENGSLSRKLSSASSLGSMEE
SYFLQASLDSSDSFSERRNAGEATMSPYYMKSMTPSAFEASLRQKEGELASYMSRLASME
SIRDSLAEELVKMTEQCEKLRAEAGMLPSIRAELDALRRRHSAALELMGERDEELEELRA
DIVDLKEMYREQVNLLVNKIQIMSSSVGA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggttcagtgggaaagtctctttggggaactttcccgatctcgctggggccgtg
aataagctccaggagagcgtcaagaacatcgagaagaatttcgatagcgcccttgggttc
gaagaaaaagagaaggccgaatccggtaatgaagcttcaggattatggccttcgtctact
gaaaggaaattgctatttgatcctgttatgtcctttatgggacaaacaaatgagggaagt
agtgttgattcatcacagaaagctgagtcttcagagcatccgccaaaggttgacaaatca
tcaggggaatctgaatctccacaaaaaccatctactgttgaggccaaggaaggggtcaaa
acagaaactttacaacactcttcaactgaacagatggctgataaggaggaaactgaagtt
gtcaaggaagaaacagatgataagcatgctgtgacggtggaggaaacaaagactctggta
gcagagcctgaaaaatctgaatctgaatcatcttcactgccagttgagccctttgaaccc
actgctaagaatgatggcccatcagaatcagtggattctcaagatgacaacaagatttca
gtagtgggaccctcagtaaatccagaaacattgcagggtaagtcagcagctgttgaagta
gatcaagttgaggagggtcatactgttcttctgcgtgaggcacatgatgttgatgtgcat
gagactgtggatgaacaaaggacacaagtagagcagaacgatggacatatgactcaggct
ggagagattgttgaaacagttgctatggttgaaggtgagactccaactgatagccagcct
ggaggtttgactgagccctccagtttacactctgctactactgaggaaattcatagtggt
agatcttctaccaatcaaccaccgggtgtaaatccttctgatgatgcttcagatgcggtt
tctgaatcggtttcaaaagaacataatgccattgttgaggaacctgaagttgagcaacaa
gctgatgataatgaagctgatgttcaagagcaacatctgagctcaggggaaaatgtgtct
gactcttcagtgattgaattggagaaggtgaagatggagatgaagatgatggaagctgca
ttgcaaggtgctgcaagacaagcccaggcaaaagctgatgagattgcaaagtttatgaac
gaaaatgagcaattaaaatctgcgatcgaggatttgaagagaaaatccaatgacgcagaa
gtcgagtcactgcgagaggaataccatcaaagggttgcaacacttgaaaggaaggtgtat
gctcttactaaggaaagggacacgcttcggcgggagcagaataagaaaagtgatgcagct
gctcttctgaaggaaaaggatgaaataattaatcaagttatggctgaaggtgaagagctt
tcaaaaaagcaggctgctcaagaaggacaaattaggaaattaagggctcagatcagagag
tttgaagaagagaagaaggggttgattactaaacttcaggtagaagaaaataaagtggag
agtatcaagagggacaagacggctacagaaaaattgctgcaggaaactatagaaaagcac
caaacagaactcgcagcacagaaagagtattatactattgctttggctgttgccaaggag
gcagaagcgatggcagaggcacgtgccaacagtgaagccagatctgagcttgagagtcgt
ctaagagagtctgaggaacgggaagctatgctagttcaggcacttgaagaattacgacaa
acgctgactagaacggagcagcaggcagtattcagagaagacatgcttcgccgggacatt
gaggatcttcagagacgttatcaagcaagtgagcggcgatgtgaggaattgattacgcaa
gtaccggaatctaccaggcctcttcttaggcagattgaagctatgcaggaaacaacttca
agaagggcagaagcttgggcagctgttgagaggtctcttaactctcggctccaggaagca
gaggccaaagctgcggctgctgaggaaggagagcgatctgtgaatgagcgcttgtctcaa
accttatctcgaattaatgttcttgaggctcagatttcatgtcttcgagctgaacaatcc
cagttaagtaagtctcttgaaaaggagagacagagagcagctgaaaataggcaggagtac
cttgcagcgaaggaggaagctgatactcaagaaggccgtgcaaaccagcttgaagaagaa
attagggaactcaggcgaaaacataagcaagagttacaagatgcattgatgcatagggaa
ctgctacagcaggaggtagaaaaggagaaagctgctaggttggatttggaaaggacatct
cgtgcgcgttctactactgtatctgatcaaagtgctataacaaggcacaattcagcttta
gagaatggaagcttgagccgaaaactttcaagtgctagcagcctggggagcatggaggaa
agctattttctgcaagcatctttggactcatccgatagtttttctgagaggagaaatgct
ggggaggcaaccatgagtccttactatatgaagagcatgacacctagtgcttttgaagct
tcccttcgccagaaggagggtgaacttgcatcttacatgtctcgtttggcatccatggag
tctattcgcgattctcttgctgaggagttagtcaaaatgacagaacagtgtgaaaagtta
cgggcagaggctggcatgttacctagcatacgagcagagctagatgcactaaggaggcgg
cactctgctgcactggagctaatgggcgaacgtgatgaggagctggaggaacttcgtgcg
gatattgtagacttgaaggagatgtaccgagagcaagtaaacttgcttgtcaacaagatc
cagataatgagttcatcagttggagcctaa
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