Prunus mume (Japanese apricot): 103328138
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Entry
103328138 CDS
T03196
Name
(RefSeq) F-box/LRR-repeat protein 14
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103328138
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103328138
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Gene cluster
GFIT
Motif
Pfam:
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box_5
LRR_14
LRR_6
Motif
Other DBs
NCBI-GeneID:
103328138
NCBI-ProteinID:
XP_008228751
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Position
LG4:6270982..6273971
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AA seq
468 aa
AA seq
DB search
MMDCLPDQLVWEILSRVKKTTDRNSLSLACKHLHGLDNEQRQSLRVGCGLDPANEALTSL
CSRFSNLTKVEITYAGWMSKLGKQLDDEGLLILSNCCPSMVDLTLSYCTFITDLGLGHLS
SCSKLSALKLNFTTRITGCGILSLVAGCKVLTILHLVRCLNVSSFEWLEYLGKLETLEDL
SIKNCRAIGEGDLIKLGSSWKKLKCLQFEVDVNYRYMKVYDRSAVDRWQKQWVACENMVE
LSLVNCIISPGRGLACVLGKCKNLEKIHLDKCVGVRDSDIIGLAQKSKNLRSIFLRVPSD
FSLPLVMNNPLRLTDECLKAMAQNCSMLESVRISYSDGDFPSFSSFTLDGILSLIQKCPL
RELAFDQVYSFNDVGMEALCLAQYLETLELVRCQEISDEGLQHVGQFPRLSILRLIKCLG
VSDDGLKPLVGSYKLELLAVEDCPQISERGVLGAAKSVSFRQDLSWLY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatggattgtttgccggaccagttagtatgggagatcttgagcagggttaagaaaacc
actgatagaaactctttgtctttggcgtgtaaacacctgcacggattggataatgaacag
agacaatctcttcgggttggttgtggattagaccctgcaaatgaagctttgacttctctc
tgcagtaggttttccaacttgacaaaggtagagataacttacgctggttggatgtccaaa
ctaggaaagcagttggatgacgaagggcttcttattctttccaattgctgcccttctatg
gttgatctcacattaagctactgcaccttcatcactgatttgggccttggtcacttgtct
tcttgctcaaaactttcagctttgaagttgaatttcacaacaagaattactggctgtggc
atattatctcttgttgcaggctgcaaagttctcactatcctccaccttgtacgatgtcta
aatgttagcagttttgagtggcttgaatatcttggaaagcttgaaactcttgaagatctc
tcaattaagaattgtagagctattggggagggtgatttgattaagctaggttctagttgg
aaaaaactaaaatgcttgcaatttgaggtagatgtgaattacagatatatgaaagtttat
gatcgttcagctgtggatcgctggcaaaagcagtgggtcgcatgtgagaacatggtggaa
cttagcttggtaaattgtatcatcagccctgggaggggccttgcttgtgtgctggggaag
tgcaagaatttggagaagattcacttggacaagtgtgttggggtaagggactctgacatt
ataggcttagcccaaaaatcaaaaaacctccgctccattttccttcgagttccatcggat
ttctcacttcctcttgtgatgaataatccactgagattaaccgatgaatgtctaaaagcc
atggctcagaactgttcgatgcttgaatctgtcaggatatcgtattctgatggggatttc
ccttcattttcctcatttacattggatggaatccttagtttgattcagaagtgccctttg
cgggaacttgctttcgaccaagtgtattcctttaacgatgttggaatggaagctctttgc
ttggctcagtatcttgagaccttggagctggtcagatgccaagagataagcgacgagggg
ctgcagcatgtggggcagtttccccggttgtccattctgcgtttaatcaagtgtttaggg
gtttctgatgatgggttaaagccacttgtagggtcatacaaattggaattgttggctgtg
gaagattgtcctcaaatttctgaaagaggagttctgggagctgcaaagtctgtatctttc
agacaagacttgtcatggctgtactga
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