Prunus mume (Japanese apricot): 103328178
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Entry
103328178 CDS
T03196
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 8 isoform X2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103328178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103328178
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103328178
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
103328178
NCBI-ProteinID:
XP_008228799
UniProt:
A0ABM0NRN4
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Position
LG4:complement(6827877..6833830)
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AA seq
754 aa
AA seq
DB search
MFDCGYKSQYIGGQKEKFVRLDDLDSTMSMSADTSKMKKSVFHIEALPFTGRNRKATSSK
SLKYGIQRGSDGLKTFGRTLRTGVTRAVFPEDLKVSDRKIFDPQDKSLLLWNRLFVISCI
FAISIDPLFFYLPIFDEKQDCLTIDRNLAATTITVRSLVDAFYLIRMTLQFRTAYIAPSS
RVFGRGELVIDSSQIAKRYLHRYFFVDFVSVLPLPQIVVWRFLHGTGSEVLATKQALLFI
VWFQLLPRFIRLLALNSDLKKSAGSFAESAWAGAAYYLLWFLLAAQVTGAAWYLLAVERY
DTCWREACIESKKCRINYLYCGISENIPGYKEWSDIRVEVLNKSCTAEGDNLPFKFGIFT
EAISSKVIASTEFFSKFLFCLWWGLKNLSTLGQGLETSTFALEILFSIGIGIFGLILFAL
LIGNIQTYLQSLTIRLEEMRIKKRDSEQWMHHRWLPQDLMERVRRYDQYKWLETRGVDEE
SIVRSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLCTENTYIVREGD
PVGEMLFIIRGRLESVTTDGGRSGFFNSGVLKEGDFCGEELLTWALDPKASSNLPSSTRT
VKAITEVEAFALEAEELKFVASQFRHLHSRQVQYTFRFYSQQWRTWAACFIQAAWRHYRR
KLAEKLRKEEEEGFDYSEGDDDNDDDDYQGGSITSKLRATFFASRFAAKALRGHRRRSAG
STGSTGSMGSMGSTELMKLQKPPEPDFSAYDDKN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtggttacaagtcacaatacattggtggccagaaagagaaatttgtcaga
ttggatgacttggactctacaatgtcgatgagtgctgataccagtaaaatgaagaaatct
gtatttcatattgaggcattaccttttactgggagaaacagaaaggcaacatcatcaaaa
tcattgaagtatggaattcagaggggatcagacggactaaagacatttggtagaacatta
agaactggggtcacccgtgcagtgttcccggaagatcttaaagtgtctgatagaaagata
tttgacccccaagacaagtcccttctgttatggaacaggctttttgtcatatcatgtatc
tttgcaatatcaattgatcctttgttcttttaccttccaatcttcgatgagaaacaagat
tgcctcactattgacagaaacttagcagccacaactataactgtgcggtcattagtagat
gctttctaccttattcgcatgactttacagtttcgcacagcttatattgccccatcatct
cgggttttcggaagaggtgaacttgtgatagattcttcacagatagcaaagcgatatcta
caccgctatttctttgtcgactttgtttccgtgctacccttaccacagattgtggtttgg
agattcttgcatggaacagggtcagaggtattggctacgaaacaggcattgctatttatt
gtctggtttcaattattgccaagatttatccgcttactagctttaaattcagaccttaaa
aagagtgcaggctctttcgccgaaagtgcttgggccggggctgcatactatttgctctgg
tttttgctggctgctcaagtcactggggctgcctggtacttgttggctgtagagcgctat
gacacatgctggcgggaggcttgtattgaaagtaaaaaatgtaggataaactacttgtac
tgtggcatttctgaaaatatccctggatacaaagaatggtcagatatcagagtggaagtt
cttaataagagctgcaccgctgaaggtgacaatctgccatttaaatttgggatctttacg
gaggcgataagttcaaaggtcattgcatccacagaatttttctccaaatttttattctgt
ttgtggtggggactgaaaaatttaagtacacttggccaggggcttgaaaccagtaccttt
gctttagagattctattttccatagggataggcatttttggcctcatcctctttgcactt
ctgattggaaatatacagacctaccttcagtctctcacgattcgtctcgaggagatgagg
attaaaaagcgtgactctgagcagtggatgcaccatcgctggcttccacaagatcttatg
gaaagagttcgacgctacgatcaatacaagtggttggagactcgaggtgtagatgaggag
agcattgtccggagtcttccaaaagatctcagaagggacattaaacggcatctctgcttg
aatttggttagaagggtgcctctttttgccaatatggatgagcggttgcttgatgccatt
tgtgagcgtctaaaaccaagtttatgcacagagaatacctatattgtgcgggaaggggac
ccagttggtgagatgttattcatcattcgtggtcgcctagaaagtgtgacgacagatggt
ggtcggagtggctttttcaacagtggtgtgctaaaagaaggagacttttgtggagaagag
ctcctaacatgggcattggatcctaaagctagttctaacttaccatcatctactcgaacc
gtgaaggctataactgaggttgaggcttttgccttagaagcagaggagttgaaatttgtt
gccagccagtttaggcatcttcatagcagacaggttcagtacaccttccgtttctactcc
cagcagtggaggacttgggcagcctgcttcatccaagctgcttggcgccactacagaaga
aaattggcagaaaaactgcgtaaggaggaggaagaaggctttgactacagcgaaggagat
gatgataatgatgatgatgattatcaaggcggttcgatcacaagcaagcttcgtgccacc
ttctttgcatcccgctttgcagcaaaagcgcttcgcggtcataggcgtcgcagtgcaggt
agcacaggtagcacaggtagcatgggtagcatgggtagcacggagctgatgaagctgcag
aagccccctgaacctgacttctcagcttatgatgataagaattga
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