KEGG   Prunus mume (Japanese apricot): 103328242
Entry
103328242         CDS       T03196                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03420  Nucleotide excision repair
pmum04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103328242
  09124 Replication and repair
   03420 Nucleotide excision repair
    103328242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pmum03051]
    103328242
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103328242
Proteasome [BR:pmum03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    103328242
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      103328242
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE UBA_3 TECR_N Rad60-SLD_2 Dsc3_N UBA_RAD5A
Other DBs
NCBI-GeneID: 103328242
NCBI-ProteinID: XP_008228865
LinkDB
Position
LG4:complement(7447896..7453663)
AA seq 374 aa
MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVTEDGFLVVMLSKSKTSGLAGASSAQPTSTNPPATPPTTNSTTRPEAPAQPPPVQST
ISASDTANVHTDTYGQAASTLLAGTNLEQTIQQIMDMGGGNWDRETVTRALRAAYNNPER
AVDYLYSSIPETAEVAVPVGHFPASQATETGPANAAPVSGAPNSAPLNMFPQETLSGAGA
GALGSLAFLRNNRQFQALRSMVQANPQILQPMLQELGKQNPQLLRLIQEHHTEFLQLINE
PLEGSEGDIFDQPDGPDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEEL
AANYLLENAGDFED
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaagctcactgtaaagaccctcaaaggcagccatttcgaaattagggttcagcccact
gacaccgttatggctgtgaagaagaacattgaagatgtacaaggaaaagataattatcca
tgtgggcagcagttattgattcacaatgggaaggtcttgaaagatgaaactacattggct
gacaacaaggtcacagaagatggttttcttgttgtcatgcttagcaagagtaaaacttca
ggcttagcaggggcttcatccgctcagcctacttccacaaatcctcctgcaactccacca
accacaaattctacaactagacctgaagctcctgcacaaccaccacccgtacagagtacc
atatctgcttccgacactgcaaatgtgcatactgatacctatggtcaagctgcttcaact
ttacttgctggtactaatcttgagcagactattcaacaaataatggatatgggcggtgga
aactgggacagagaaacagttacacgtgcacttcgagcggcatataacaatccagagaga
gcagtcgactacttgtactctagtattccagaaacagcagaagttgcagtgccggtagga
catttcccggcaagccaggcaactgaaacagggccagccaatgctgcacctgtctctgga
gcacctaactctgctcctttgaatatgtttcctcaggaaacactctctggtgctggtgct
ggtgcacttggatccctcgccttcctcaggaataatcgccagttccaagcgttgcgctca
atggtgcaagcaaatccacaaattttacagcccatgctgcaggagcttggaaagcaaaac
ccccagcttttaagattaattcaggaacaccacactgagttccttcagttaataaatgaa
cctcttgaggggtctgaaggtgacatatttgatcagcctgacggccctgaccaagatatg
cctcatgccatcaacgtaaccccggctgagcaggaggccattgaacgactcgaagcaatg
ggatttgatagggctttggtcatcgaggcatttttagcatgcgatcgcaatgaagaattg
gcagcaaactacttattggagaatgctggagattttgaggattga

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