Prunus mume (Japanese apricot): 103328280
Help
Entry
103328280 CDS
T03196
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103328280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103328280
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103328280
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103328280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103328280
NCBI-ProteinID:
XP_008228894
UniProt:
A0ABM0NRV7
LinkDB
All DBs
Position
LG4:7376881..7377804
Genome browser
AA seq
307 aa
AA seq
DB search
MTLVKDNIRHKFMNNAEHRRAKFKKPNPELKMNKRVEIRSVWQQNLEYEFARVEAAIADY
PFVSFDTEFPGTILECKARDPPAYQYQIMKGNVDAMNIIQLGLTLSDHYGNLPNLGTDCC
YIWEFNFRDFDIERGDLHTADAIEFLKRHGIDFLQNKEKGICSSNFAGLMDRMVLCNKSR
LTWVTFHGSYDFGYLMKILTRKDLPMDIGGFMEEVEKKFGKRVYDIKHLIKSFQGLHGGL
EKVAHSLQVGRVAGKSHQAGSDSLLTLQTFMRLKDVHFGSFLKNKDYCSLSLNHFQGVLH
GLELEAH
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgactttggtcaaagataacattcgacacaaattcatgaacaacgcggagcacaggaga
gcaaaattcaagaagcctaacccagaattaaagatgaataaaagagtggagattcgaagc
gtttggcaacaaaatttagaatacgagtttgctcgcgttgaggccgcaattgctgactac
ccttttgtctccttcgacactgaattcccaggcaccatacttgaatgcaaggctcgggat
ccccctgcataccaataccaaatcatgaagggcaatgtggacgccatgaacatcattcag
ctgggcctaacactctcagaccactacgggaacttgcccaatttgggcacagattgctgc
tacatatgggaattcaacttcagggacttcgacattgagcgtggcgaccttcacaccgca
gacgcaatcgagtttcttaagcggcatgggatcgatttcttgcagaacaaggaaaagggt
atttgctcttccaacttcgcggggctgatggataggatggtgctctgcaataagtcccgt
ttaacatgggtgactttccatggttcgtatgatttcgggtacctgatgaagattctaact
cggaaggacttgccgatggacattggtggtttcatggaggaggtggagaaaaagtttggg
aaaagagtttacgacatcaagcacttgatcaagagttttcaagggcttcatggaggttta
gagaaagtggctcattcgcttcaggttggtcgtgtggctgggaagagtcaccaggctggt
tctgatagtctattgactttgcagacgttcatgaggctcaaggatgtgcatttcggaagt
tttttaaagaataaagactattgtagcctaagtttaaatcattttcaaggagttttgcat
ggtttagaacttgaggctcattga
DBGET
integrated database retrieval system
