Prunus mume (Japanese apricot): 103328453
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Entry
103328453 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103328453
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103328453
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103328453
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103328453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4
DUF2921
PHD_NSD
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_16
zf-P11
Motif
Other DBs
NCBI-GeneID:
103328453
NCBI-ProteinID:
XP_008229068
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All DBs
Position
LG4:9979646..9991401
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AA seq
576 aa
AA seq
DB search
MGCLSLDMGVVKILGFLWSQRRKLRFLYWVAFWLCVALVLFQPVAGLRPLRERARSWGDE
WLFVRKDESDLGPFSTWNITGTYRGTWKFPDSANSSSRFPDFRKSDGNSIIELVSTQTKI
TGVHYVQGVIIFHDVFDNEHNVGGVQIKVEGVFIWPFRQLRMVANSGKEGESSQEEDYML
SNPYHMLGVFSSQVFQESPRDKIWRKKHSPIYEMEKHCNIEIAGQISRVSSPHNDGDRDR
YHIEALMESPAVDDDGDCFSPLVLNATSVNVEVYYNKAVNYTLMVTFVSFLQVLLLIRQM
EHSNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFE
MRYLLAIWKASRPTNSGEGWETMRRELSVLYSRFYGILLGGILFMYEFHNFLRPILLLMY
SFWIPQIITNVIRDSRKPLHPHYILGMTVTRLAIPLYIFGCPNNFMRIEPDKSWCICLGV
FIGLQASILLLQHYLGSRWFIPRQILPEKYSYFRRYDQDTHHTTDCVICMTAVDLTQRSN
DCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtttgagtttggatatgggggtcgtgaaaattttggggtttttgtggtctcag
agaaggaagttgaggtttctatactgggttgcattctggttgtgtgtagctttggtgctt
tttcagccggtggcgggtctcagacccttgcgggaaagggctcgctcgtggggtgatgag
tggctatttgtaagaaaggatgaaagtgatttgggtccattttctacatggaacataaca
ggaacttacagagggacttggaagtttcctgattctgcaaatagctcttccagatttccg
gattttagaaaatccgacggcaactctatcatcgaattagttagcacgcaaacaaaaata
actggcgtacattacgtgcagggtgtaattattttccatgatgtgttcgacaatgaacac
aatgttggtggtgttcaaatcaaggtggaaggtgtatttatatggccgtttagacaactt
cgaatggtagctaacagtggaaaagagggagagtccagtcaagaagaggattatatgttg
tcaaatccgtatcatatgcttggagttttctcttcccaggttttccaagaatctcctcga
gataagatatggaggaaaaagcattctccaatttatgaaatggagaaacattgtaatata
gaaattgcaggccaaatttcacgcgtctcatccccccataatgatggtgatcgtgatcgt
taccacatagaagcattgatggagagtcctgcagtggatgatgatggagattgcttctca
cccttggtactaaatgctacttctgtcaatgttgaggtgtactacaacaaagcagtgaac
tataccttgatggtcacctttgtctcctttctccaagttcttctcttaattcgccaaatg
gaacatagcaacactcagtcgggggctgccaaagtttcaattctaatgattggccaacag
gctatcatggatgcttatctttgccttctacatttgaccgcaggaatacttgttgaatcc
ttgtttaatgcttttgcgactgccgcttttttcaagtttgttgtcttctcaatatttgag
atgagatatcttcttgctatatggaaagctagtaggccgacaaatagtggagaaggttgg
gagacaatgaggcgtgagctttcagttttatatagccgtttctatgggatccttttggga
ggcattctgttcatgtatgagttccataacttcctgagacctattcttctccttatgtac
tcattttggataccacaaataatcaccaatgttattcgtgattcgaggaaaccattgcat
cctcattacatcttaggcatgactgttactcggcttgcaatcccgttatacatatttggt
tgccctaacaacttcatgcgtattgagcctgacaagagttggtgtatttgtttgggtgta
tttattggactacaagcatcaattcttcttcttcagcactatcttggctctcggtggttc
attcctcgtcagattctacctgaaaaatatagctactttagaaggtacgatcaggataca
catcacaccacagactgtgtcatttgcatgactgcagttgatctcacacagcgttcaaat
gattgcatggtgacaccatgcgaccatttctttcattcaggttgtttacaaaggtggatg
gatataaagatggagtgcccaacctgtcggcgtccactgccaccagcctga
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