Prunus mume (Japanese apricot): 103328495
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Entry
103328495 CDS
T03196
Name
(RefSeq) zinc finger protein NUTCRACKER-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103328495
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103328495
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_STOP2_C
zf-met
Motif
Other DBs
NCBI-GeneID:
103328495
NCBI-ProteinID:
XP_008229114
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Position
LG4:10640603..10642739
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AA seq
466 aa
AA seq
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MALNEESIPPMNGFVQDPAAGSISPPPPPPPAKKKRNLPGNPDPEAEVIALSPKTLMATN
RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEPRKRVYVCPEKSCVHHHPSRALG
DLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFI
THRAFCDALAEETARVNAASNMNNIPMGGNINYQYMGYSIGAVAGPNNNIMAQQYFSSIF
KPMISTPNNIDDEASRGLSIWMMGGNNNYNNNKNHDHHRHCPPPSDYDQINNWVVGNKQL
ISSPSPYSISNSNAPHHQESITCTSTTTSSCSSSSLALISNNIISDVPSLYSSKMSATAL
LQKAAQIGSTTSSEAPLMGSFGINNISKVCGLYGVTSPDDHGHDHHAKRRSIQNCSAATT
TTTNDHHHQQETIAAGGGGGQTRDFLGVGVHAICHSSSPSINGYWT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaatgaagaatcaattccaccaatgaatgggtttgttcaagacccagctgct
ggatccattagccctcctcctcctcctcctcctgcgaaaaagaagagaaacctcccagga
aacccagatcctgaagctgaagtaatagccttgtctccaaagactctgatggccaccaac
agattcttgtgcgaaatatgtggcaagggcttccaaagagatcaaaacctgcagctccat
cgtcgcggccacaaccttccatggaagctgaagcagagaacaaacaaagaaccaaggaag
cgcgtgtatgtgtgccctgaaaagagttgcgtccaccaccacccgtcccgggctctcgga
gatctgacgggcatcaagaaacacttctgccggaaacatggggagaagaagtggaagtgt
gacaagtgctccaagcgatatgccgtgcagtcagactggaaggctcactcaaagacctgc
ggcactcgggagtacaaatgtgactgtgggactctattttcgcgacgtgatagcttcatc
actcaccgggccttctgcgatgcgttggctgaagaaacagctagagtgaacgcagcatcc
aatatgaacaacattccgatgggtggcaatatcaattatcagtacatgggatactcaatc
ggagcagtagcagggccgaataataacatcatggcacagcaatatttttcttccattttc
aagccaatgatctcaacccctaacaacattgatgatgaggcatcccgcgggctgtctata
tggatgatgggcggcaataacaattacaataataataagaatcatgatcatcatcgtcat
tgtcctccaccgtcggattatgatcagataaataattgggttgttggaaataagcagctg
atttcatcaccatcaccttattcaatctcaaacagcaatgctcctcatcatcaagaaagc
attacttgtactagcactactactagtagttgttctagttcatcgcttgctttaattagc
aataatataataagtgatgttccttccttgtacagcagtaaaatgtcagccacggctttg
ctgcagaaagcagcacaaattgggtcaacaacttcgagtgaggcgccattgatggggagt
tttgggataaataatatcagcaaagtttgtgggctctacggagttactagtccggatgat
catggtcatgatcatcatgccaagcgccgcagcatacagaattgtagtgcggctactact
actactactaatgatcatcatcatcaacaagaaactattgctgcaggaggaggaggtggt
caaactagggatttccttggtgttggtgtgcacgccatttgccactcatcatcaccatca
ataaacgggtattggacttga
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