Prunus mume (Japanese apricot): 103328616
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Entry
103328616 CDS
T03196
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00900
Terpenoid backbone biosynthesis
pmum01100
Metabolic pathways
pmum01110
Biosynthesis of secondary metabolites
Module
pmum_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103328616
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pmum01006
]
103328616
Enzymes [BR:
pmum01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
103328616
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
103328616
2.5.1.29 geranylgeranyl diphosphate synthase
103328616
Prenyltransferases [BR:
pmum01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
103328616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
103328616
NCBI-ProteinID:
XP_008229240
LinkDB
All DBs
Position
LG4:complement(11758046..11759248)
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AA seq
365 aa
AA seq
DB search
MAIFSTIPSYENSLLLRNPNIGLNKSPRPRTSNGSLRLISLKIRATRTQVADSSSVQPLL
PKPFEITQLPIFQFDEYLSMKAKKVEQALNEAVPLQYPTKIHRAMRYSLLAGGKRVRPVL
CLASCELVGGDQSLAIPTACAVEMIHTMSLIHDDLPCMDNDDVRRGKPTNHKAFGEETAI
LAGDALLSLAFEHIAAKTTKVVSPERVVRAIAELGSAVGSSGLVAGQIVDVLSEGKEVTL
EELEYIHVHKTAKLLEASVVCGAIIGGGNEGEVERMRKYARCIGLLFQVVDDILDVTKSS
KELGKTAGKDLASDKATYPKLMGIEGAKNFAAKLVAQAIEELTHFDAAMAAPLYCLANYI
ANRQT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggctattttctcaacaattccaagctatgaaaactcactcctcctcagaaaccctaat
attggtctcaacaaaagtcctagacctagaacatcaaatggtagcctcaggctcatttcc
ttgaagattagggccactcgtacacaagttgctgactcatcttcagtccaaccattgctc
cccaaaccatttgaaattacccaattgcccatattccaatttgatgagtacctgtccatg
aaggcaaagaaggtggagcaagctttgaatgaggctgtgcctttgcaataccccacgaaa
atccatagggcaatgaggtactcacttttagccggcggaaagcgtgtgcgtccagttcta
tgccttgcttcgtgtgaattagttggaggggatcagtctcttgcaatcccaacagcttgt
gccgttgaaatgatccacaccatgtcacttattcatgatgatcttccttgcatggacaac
gacgatgttcgtcgcggaaagcccacaaaccacaaggcttttggggaagaaaccgctatt
ttagccggtgatgccctcctctcccttgccttcgagcacatagcggctaagaccacaaaa
gtggtctcccctgaacgcgtggttcgggccattgccgagcttggttcagccgtagggtca
tcaggcctcgtggcgggtcaaattgtcgacgttttgagtgaaggtaaagaagtgacacta
gaagaattggagtacatacatgtgcataaaaccgcgaagctccttgaggcttcggtggtt
tgcggggcaataattggaggagggaatgaaggtgaggtagagaggatgaggaagtatgca
aggtgcatagggttgttgtttcaagttgttgacgacattttggatgtgacaaagtcgtca
aaggaattgggaaagacggctgggaaggacttggcaagcgataaggcgacatatccaaag
ctcatgggcattgaaggggcaaagaattttgctgctaagttggtggctcaagcaatagaa
gagcttactcattttgatgctgctatggctgccccattatattgtttagccaactacatt
gccaatagacagacttag
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