KEGG   Prunus mume (Japanese apricot): 103328701
Entry
103328701         CDS       T03196                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103328701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103328701
Enzymes [BR:pmum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103328701
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    103328701
SSDB
Motif
Pfam: Sina_ZnF Sina_RING DNA_pol_phi DUF4729 Myc_N Cwf_Cwc_15 RNA_pol_3_Rpc31 Nop14 BUD22 zf-C3HC4_2 RNA_pol_Rpc4 Pox_Ag35
Other DBs
NCBI-GeneID: 103328701
NCBI-ProteinID: XP_008229332
LinkDB
Position
LG4:13214204..13221822
AA seq 422 aa
MARFALGGDEDGEGEGSRIPRPKKPRLAPNLLPQYPAARIAIIEQQPQQPPQPQSQQLRT
VEEDEEADEESEGEEMESEGEVEADEESEEEDEDEEEEDEEGEEEITVGCLQQVGNSGHV
SELRIIDLLRQNRTAPANPKVGSASASLTSNAGVQEGSPPPISPVTDGSLVFTLADPEVL
DCLICYEPLTIPVFQCENGHIACSSCCTKIKNKCPSCSWPIGYNRCRAIEKILESIRISC
QNIKHGCKEMVTYNKKNEHEKACVYSPCSCPLSGCNFISSSKQLYLHFTVSHVDYATRFL
YGINFSITLNIKDKFLVLQEKREGILFILDNHAEKLGNLVSLCCIQPIFKGGFYYDLLAK
TNESSLRFQSFTKNSAGQVISPSSTGYFIIPSDFFSSGKLHMDLCIWRNGQCPASFQSID
VA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcgagattcgcgttaggtggagatgaagatggagaaggcgaaggatcccgtattccc
aggcccaagaagcctcgtctcgctcctaatctccttcctcaatatcccgcagcccgcatc
gccataatcgaacaacaaccacaacagccaccgcaaccacaatcgcaacagctacggacg
gttgaggaagatgaagaagcagatgaagaatccgaaggagaagaaatggagagtgaaggc
gaagtagaagcagacgaagagagtgaagaagaagatgaagatgaagaagaagaagacgag
gaaggagaagaagaaatcaccgttggctgcttacagcaagtaggaaattccggccacgta
tcggagctgcggatcatcgatttgcttcggcagaaccgcacagcaccagccaaccccaaa
gttggttctgcttcggccagccttacatccaacgccggagtccaagagggcagtcctcct
ccgatctcacccgtcaccgatgggtcgcttgtcttcaccttagccgacccagaagtgctt
gattgcctcatttgctatgaacccttgaccatccctgtcttccagtgtgaaaatgggcat
atagcttgctcctcttgctgcaccaagattaaaaataaatgcccctcctgttcctggccc
attggctataatcgttgccgggccattgagaagattctggaatcaattagaatttcatgc
caaaacatcaagcatggctgcaaagaaatggtaacttacaataaaaaaaatgaacatgaa
aaggcatgtgtgtattcaccttgttcatgccccctttcaggctgcaactttatctcttca
agcaagcagttatacctacacttcaccgttagtcatgtggattatgcaacacgcttcctg
tatggcatcaatttttccatcaccttaaatattaaggacaaatttcttgttctccaagaa
aagagagaaggtatattatttatccttgacaatcatgctgaaaaacttggaaatttagtg
tcgctttgttgtattcaacccatcttcaagggaggcttctactatgaccttcttgctaaa
accaacgaaagttctctcagattccagtccttcacaaagaactctgcaggccaggttatt
agcccttcttcaacaggttactttataatccctagtgattttttcagttctggcaagctc
cacatggatctctgcatatggcgtaatggtcaatgcccagcatcctttcaaagtattgat
gttgcttaa

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