Prunus mume (Japanese apricot): 103328752
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Entry
103328752 CDS
T03196
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103328752
03029 Mitochondrial biogenesis [BR:
pmum03029
]
103328752
Enzymes [BR:
pmum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103328752
DNA replication proteins [BR:
pmum03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103328752
Mitochondrial biogenesis [BR:
pmum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
103328752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Pif1_2B_dom
AAA_22
DEAD
AAA_11
NPHP3_N
AAA_16
PhoH
Herpes_Helicase
UvrD-helicase
ResIII
nSTAND3
AAA_7
TsaE
NACHT
SLFN-g3_helicase
ATPase
Helicase_RecD
ABC_tran
ATPase_2
Sigma54_activat
NTPase_1
ATP-synt_ab
NB-ARC
TrwB_AAD_bind
AAA_5
AAA_14
T2SSE
cobW
RNA_helicase
Mg_chelatase
AAA
Myosin_head
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
103328752
NCBI-ProteinID:
XP_008229389
LinkDB
All DBs
Position
LG4:complement(13846505..13848787)
Genome browser
AA seq
515 aa
AA seq
DB search
MLGMKLFGCALSAHRNFSTKITGKNAKWAQGKYKSGYKPREGEAKNTKTRERVQWTDQQK
QVMSAISEGKSVFITGSAGTGKTILVKHIIKQLKKCHAPSKVFVTAPTGVAACAISGQTL
HSFAGIGCAMADRDTLLHRISKNDKAYKRWRKAEALVLDESSMVDAELFESLEFIARAIK
QVDEVWGGIQLVVSGDFFQLPPVKPQQKSGGKEFAFEAECWDSSFDLQVNLTKVFRQSDP
QLIKLLQGIRRGESDPEDLKLLEQSCSKAEPDPTVVQLYPRNEDVNRVNSSRLASLGNEL
VVYTAVDSGEDSLKRQLEQGIAPKEIALCEDARVMLVKNLNTWRGLVNGATGTVTGFYES
EDVGVTRICDDGLLPVVRFDSGLEMTIEPNTWTTKEGDSVAKREQLPLILAWASSIHKCQ
GMTLDRLHTDLSRAFENGMVYVALSRVRSLEGLYLSGFDPSKIKVHPKVVQFYNKFTSEQ
DKEGEDDNVSQNKNGSNDDGSQEIDGRKYVRVYLK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtatgaagttgtttggctgtgcattgtctgcgcatagaaattttagcaccaaa
atcactggcaaaaacgcgaaatgggctcaaggtaaatacaagagcggatacaaacctaga
gagggagaggccaaaaacactaaaaccagagagagggttcaatggactgaccaacaaaaa
caagtcatgtcagccatttctgagggaaaatcggtgttcattaccggttctgcggggacc
gggaagacaatcttggtgaagcatattatcaaacaattgaagaaatgtcatgcaccttca
aaggtttttgtcacagcacctacgggtgttgcggcttgcgcaattagtgggcagaccctt
cactcttttgctggtattggatgtgctatggctgatagagacactttgctacataggatt
tccaagaatgataaggcttataagaggtggcggaaagccgaggcgttggttttagatgaa
agtagcatggttgatgcagagttgtttgagagtcttgagttcattgcccgagccattaag
caagtcgatgaagtttggggtgggattcaacttgttgtgagtggggatttctttcagtta
ccgcccgttaaacctcaacagaagtcagggggtaaggaatttgcatttgaagcagagtgt
tgggattctagctttgacttacaggttaaccttaccaaagtttttcggcaatctgacccg
caactgatcaagttgcttcagggtataagaagaggggagagtgatcctgaagacttaaag
ttactagaacagtcttgctcaaaagccgagccagatcctactgtggtacaactctatcca
aggaatgaagatgtaaatagagtgaattcaagtagattggcaagcttgggcaatgaactt
gttgtttatacagctgttgatagcggggaggattctttgaagaggcagcttgaacagggg
atagcgcctaaagaaattgccctgtgcgaagatgctagggtgatgctggtaaaaaatttg
aatacttggcgtggcctggtgaatggtgccactggaactgttacgggattttatgagtca
gaggatgtgggtgtgacaagaatatgtgatgatgggctgctaccggttgttagatttgat
tcggggttagaaatgacgattgaaccaaatacatggactacgaaagagggagattcagtc
gctaaaagagagcagctacctctcatactggcatgggcttcaagcattcacaagtgtcag
ggtatgactcttgaccgccttcacaccgatctctccagagctttcgaaaatggaatggtt
tatgtagctctttccagagtgagaagcttggaaggcctgtatttatctggtttcgacccc
tcgaagattaaggtgcaccctaaggttgtgcagttttataacaaatttactagtgaacaa
gataaggagggtgaggatgataatgtcagccagaacaaaaatggcagcaatgatgacggc
agccaggaaattgatggcagaaaatacgtgcgggtttacttgaaataa
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