Prunus mume (Japanese apricot): 103328867
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Entry
103328867 CDS
T03196
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103328867
Membrane trafficking [BR:
pmum04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
103328867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
VBS_C3G9
Syntaxin_2
Occludin_ELL
Zw10_N
ING
Prominin
ANIS5_cation-bd
DUF6988
Med11
Cauli_AT
CoV_S2
JHD
ZNF380_CC
Laminin_II
V-SNARE
Vps53_N
Motif
Other DBs
NCBI-GeneID:
103328867
NCBI-ProteinID:
XP_008229493
LinkDB
All DBs
Position
LG4:14576076..14584212
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AA seq
261 aa
AA seq
DB search
MDPLSAISEELAEIDGQITDIFRALSNGFQKLEKIKDSNRQSRQLEELTDKMRDCKRLIK
EFDREVKNIERVNDPDTSRMLNEKKQTMIKELNSYVALKKQYASNLENKKIDLFDGPAEE
YGEQNVLLASSMTNQQLIDNGNQMMDETDQAIERSKKVVHETINVGTETAAALKAQTEQM
SRIVNELDSIHFSIKKATKLVKEIGRQVATDRCIMGLLVLVVIGVIAIIIVKLVHPNNKD
IRDIPGLAPPAMTRKLLWNPN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatccgttatctgcaatcagcgaagagctggcggagatcgacggccaaatcactgac
attttccgtgcattatcaaatgggtttcagaagctggagaagattaaggactcgaatagg
caaagtaggcagcttgaagagctcactgacaagatgcgagactgtaagaggcttatcaag
gaatttgacagagaagtcaagaatattgagagagtaaatgacccagacaccagtagaatg
ctgaatgagaaaaagcagacaatgatcaaagagttgaattcatatgtggctctgaaaaag
caatatgcgtcgaaccttgaaaacaagaaaattgatctctttgatgggccagccgaggaa
tatggggaacagaatgtcttgctagcctcgtctatgacaaatcaacaactaattgataat
ggaaaccaaatgatggatgagacagatcaagcgattgagagatcaaaaaaggtcgttcat
gagaccatcaatgttggaacagagacagcagcagcactcaaagctcaaactgaacaaatg
agtaggattgtcaacgagctggactcaatccatttctcaatcaagaaagctactaagctg
gtcaaggaaattggtaggcaggttgcaactgataggtgtattatgggattacttgtcctg
gtggtcattggagtcatagccatcattattgtgaagctcgtccatccaaacaacaaggac
attcgagatattcctggattagcccctcccgcaatgacccgaaaattactgtggaatcct
aattaa
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