Prunus mume (Japanese apricot): 103329101
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Entry
103329101 CDS
T03196
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103329101
Membrane trafficking [BR:
pmum04131
]
Protein recycling
Others
EARP complex
103329101
Endosome - Golgi transport
Tethering complex
GARP complex
103329101
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
Vps54_N
COG4_N
DUF401
Motif
Other DBs
NCBI-GeneID:
103329101
NCBI-ProteinID:
XP_008229750
LinkDB
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Position
LG4:16245770..16254233
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AA seq
821 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIHSEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATRAVEELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEASAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSD
FSSLGTGKESEETNLLQQLSDACLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRTNEEIWKIFPTPWHVPYRLCIQFCKKTRKQLEDIHNNQKEKPDV
GTLLLALQRTLEFEDELAEKFGGGTRGREIGNEIEEIGRGENTSQSASDIRKKYEKKLGA
HQDSTEEKDKDLSVPGAGFNFRGIISSCFEPHLNVYTELEEKTLMENLEKLVQEETWDIE
EGSQNNVLSSSMQLFLIIKRSLKRCSALTKNQTLFNLFKVFQRILKAYATKLFARLPKGG
TGIVAAATGMDGQIKTSDRDERVICYIVNSAEYCHQTSGELAESVSKIIDSQFADGVDMS
EVQDEFSAVITKALVTLVHGLETKFDAEMAAMTRVPWGTLESVGDQSEYVNGINMILASS
IPILGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKQISETGAQQMLLDTQAVKTILLEI
PSLGHQTSRAASYSKFVSREMSKAEALLKVILSPIDSVADTYRALLPEGTPMEFQRILEL
KGLKKADQQSILEDFNKHGPGITQPSIPPPAAPPIPLPTAPTVALISNPASAGLIASRDD
VLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcaagcgctttggaatacatcaaccaaatgttccctacagaggcgtctcta
tctggtgtggagccgcttatgcaaaagatacacagtgagattcggcgtgtggatgctgga
attttagctgcggttcgccaacagagcaattcggggaccaaagccaaagaagatctcgct
gctgctacgcgtgctgtggaggaactcatgtataagatccgagaaattaaaacgaaagct
gagcagagcgagacaatggttcaagaaatatgtcgggacattaagaagttagactttgcg
aagaagcatataacaactacgattactgctcttcatcgtctgaccatgctcgtctctgct
gttgagcagcttcaagtgatggcttcaaaacgacaatataaagaggcttctgcacagttg
gaggctgtgaaccagttatgtagccattttgaagcttatagggatattcctaaaatcacg
gagctgagggagaaatttaagaatatcaaacaaatactaaagtcacacgtgttttccgat
ttctcgagcttaggaactggaaaagagtcagaggaaactaatttactccagcaactatct
gatgcttgcttggttgttgatgctttagagccgtctgtgagggaagaattagtaaataac
ttttgcagcagggagcttacttcttatgagcagatctttgaaggagctgaactagctaaa
ttggataaaactgaacgaagatatgcatggatcaagcgtcgtatgagaacaaatgaagaa
atctggaaaatctttcctactccatggcatgttccttatcggctctgtattcagttctgt
aaaaaaacaaggaagcagctagaagatatacataataatcagaaagaaaagcctgatgtt
gggacattattgttggcactacaacgaactcttgaatttgaggatgaattggcagagaaa
tttggtggtggtactcgaggcagggagattggaaatgagattgaagaaattggcagaggg
gaaaacactagtcaaagtgcttcagatattagaaaaaagtatgaaaaaaagcttggtgca
catcaggatagcacagaggaaaaggataaagatttatcagtgcctggagctgggttcaac
ttccgtggaatcatttcatcttgctttgagcctcacttgaatgtatacacagaactagaa
gagaaaacactaatggagaatttggagaaacttgttcaggaagaaacatgggatattgag
gagggaagtcagaataatgttttatcaagtagcatgcagttgtttctcataatcaagagg
agcttaaagcgatgcagcgctttaacaaagaaccagacattatttaatttattcaaggtg
tttcaaaggatactcaaagcatatgctacaaagctttttgcaagactacctaaaggtggt
acaggaattgttgcagcagcaactggtatggacggacagataaagacatctgacagagat
gaaagggtgatttgttatattgtcaactcagcagaatactgccatcagacgtctggtgaa
ctggctgaaagtgtatccaagataattgactctcagtttgcagatggggtggatatgtca
gaagtgcaggatgaattttcagcagttataacaaaagcattggtaaccctggtgcatggc
ctggaaactaagtttgatgctgaaatggctgcaatgacacgagttccatggggtacgctt
gaaagcgttggtgaccaatcagagtatgttaatggcattaatatgatccttgctagtagt
attcctatacttggaagccttctttcaccgatctacttccaatttttcttggacaagctt
gcatcatcccttggtccacgtttctatgctaacattttcaaatgcaagcaaatatcagaa
actggagctcaacaaatgctattggatactcaagctgtaaagacaattcttttagagata
ccatcccttggtcaccagacttcacgcgctgctagctattcaaaatttgtaagccgtgag
atgagcaaagctgaagcacttctgaaggtcatactgtccccaattgattctgttgcggat
acttaccgggcgttgctaccagagggaacgcccatggagtttcagcgaattctggagctc
aagggtcttaaaaaggcagatcagcaaagcatactagaggacttcaacaagcatgggccc
ggaattacacaaccttctatcccaccaccggctgccccacccatccctctcccaactgcc
cctacagttgctctaatatcaaatcctgcttcagccggacttattgcttctagagatgac
gtgctaaccagagcagctgcactggggcgaggtgcagccacaacagggttcaagaggttc
cttgcattaaccgaagctgcaaaagatcggaaagacgggcctttcaggaagctcttcaac
gcctga
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