Prunus mume (Japanese apricot): 103329158
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Entry
103329158 CDS
T03196
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103329158
03036 Chromosome and associated proteins [BR:
pmum03036
]
103329158
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103329158
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103329158
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
103329158
microRNA pathway
RISC loading complex
103329158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
103329158
NCBI-ProteinID:
XP_008229810
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Position
LG4:16543886..16551585
Genome browser
AA seq
898 aa
AA seq
DB search
MEDVAGPGNAGGDPHSSPPSPTIPPNLKPELVAPPKYSIMSRCGTGTTGQTIPLLANHFK
VSVNVPDAVFYQYFVRITSEDKIAVEGKGIGRKLIDRLYQTYSSELGGKKFAYDGDKALY
TLGPLPQRRLEFSVVLEETFAKHENGSPLADKRSRRSFRSKTFNVEISYAAEIPLKSIAL
ALRGVDIDNTQDALKVLDIILRQQAANTGCLLVRQSFFHDDSRNFVDVGAGVKGVRGFHS
SFRPTQGGLSLNMDVSTTMILTPGPVIDFLITNQDVREARYIDWVKAKKMLKNMRINARH
RNMEFKVIGLSEKPCNQQYFPMKLKSGNGTTEGQTVEITVYEYFTKHCGVELTSSQYMPC
LDVGKPKRPNYLPLELCSLVSLQRYTKALSSMQRASLVEKSRQKPHERIRTVTDAVKKYQ
YDDDPMLATCGISIEKQLTQVNGRVLETPKLKVGNSDDCIPHKGRWNFNNKTLFNPTRID
RWLVVNFSARCDTSHISRELINCGRKKGIFIERPFTLLEEDPQCRRQSPVARVEKMFEQI
LAKLPGEPQFILCVLPEKKNCDIYGPWKKKSLSEFGIVTQCISPSKINDQYLTNVLLKIN
SKLGGINSLLAIEHSSCVPLVNDTPTMILGMDVSHGSPGRSDIPSVAAVVGSRSWPLISR
YRAAVRTQSPKLEMIDALYKPLENGTDAGIIRELLVDFYKTSNGRKPTQIIVFRDGVSES
QFNQVLNIELDQIIKAYQHLGEVDVPKFTVIVAQKNHHTKLFQTGGSTDNVPPGTVVDTN
IVHPRNYDFYMCAHAGMIGTSRPAHYHVLVDEIGFSPDGLQNLIHSLSYVYQRSTTAISI
VAPICYAHLAAAQVGQFMKFEDLSETSSGNGSVTSAESIPFPELPKLHKNVQGSMFFC
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtagctggccctggaaatgccggtggggacccacattcgtccccaccttct
ccgaccataccccctaatttgaagccagaactagtggctcctccgaaatattctattatg
agtaggtgtgggactggaactactggacaaacgataccgttgcttgcaaaccactttaaa
gtttctgtgaatgttccagatgctgtattttaccagtattttgttcgtattacttcagaa
gataagatagctgttgaaggcaagggaattgggagaaaactgattgacaggctttatcaa
acatactcttcagaacttggtggtaaaaagtttgcatatgatggggacaaagctctgtac
acactgggtcctctgccacagagaaggcttgagttttctgttgtgctggaggagacattt
gcaaagcatgaaaatgggagccccctggctgacaaacggtcaagacgttcttttcggtca
aaaactttcaacgtagaaataagctatgctgccgaaatacctctgaagtcaattgctctt
gccctgagaggagtggatatagataatactcaggatgcattgaaagtgcttgatatcatt
ctgcggcagcaagcagctaacacggggtgtcttctagtacgacaatcattctttcatgat
gactccagaaactttgttgatgttggagcaggtgtaaagggtgttcggggatttcattcc
agtttccgtccaacacagggtggcttgtccttgaatatggatgtatctacaacgatgatc
ctaacgcctggacctgtcattgattttctgataaccaaccaggatgtacgagaagctcgc
tacattgattgggttaaggccaagaaaatgctgaaaaatatgaggattaacgcaaggcac
cgtaacatggaattcaaagtaataggcttaagtgagaagccctgtaatcaacaatatttc
cctatgaagttaaaaagtggcaatggcacaactgagggtcagactgtggagattactgtg
tatgagtattttactaagcactgtggtgtagaactcacctcttcccaatacatgccatgc
cttgatgttggcaagccaaaaaggcccaactatctgccactggagctctgttcgcttgtt
tcactacaacggtatacaaaggctttatcttcaatgcagagggcatccttagttgaaaaa
tcaaggcagaagcctcatgaaagaatacgaactgtgactgatgcagtgaaaaaataccag
tatgatgatgatcctatgcttgctacatgtggtatttctatagagaagcaattgactcag
gtcaatggccgtgttctcgagactccaaagttaaaggttggtaacagtgacgactgcatc
cctcataagggacgatggaatttcaacaataagacacttttcaaccctactcgcattgac
cgttggcttgttgtcaacttctctgcacgctgtgataccagtcatatctcacgggaactt
atcaactgtgggaggaagaagggcatttttattgagcgtccctttacattacttgaagaa
gatccacaatgtagaagacaaagccctgtagcaagagttgaaaagatgttcgaacagatt
ctagctaagcttccaggggaacctcaattcattctttgtgtcttaccagagaaaaaaaat
tgtgatatatatggaccttggaagaaaaaaagtcttagtgagttcgggattgtcacacaa
tgcatttccccttccaagattaatgatcagtacctgacaaatgttcttcttaagatcaat
tctaagcttggaggaataaattctttgttggcaatagaacactcctcatgtgttcctctg
gttaatgatactcctacaatgattctggggatggatgtctctcatgggtctcctggtcgc
tcagatattccttctgttgctgcggttgttggctctcgaagctggccacttatttcaagg
tacagagcagctgttagaacacaatctcctaagctagagatgatcgatgctctgtacaag
ccacttgaaaatggaactgatgctggtattatcagggaactgcttgtggacttctataaa
acaagcaacggacgtaaaccaactcagattattgtcttcagggacggagtcagcgaatca
caatttaatcaagtcttgaacatcgagctggaccaaatcataaaggcttaccagcacctt
ggggaggttgatgttccaaagtttactgtgattgttgctcagaaaaatcatcacacgaag
ctatttcaaaccgggggttccactgataatgttccacctgggacagttgtggacacaaat
attgtgcatccaaggaattatgatttctacatgtgtgctcatgcaggaatgattggaact
tcgcggccagcacactatcatgtcctggttgatgagattggattttctcctgatggcttg
caaaacctaatccactccctttcttacgtgtaccaaaggagtacaactgcaatctccatt
gtggcgcccatatgttatgcccaccttgctgctgcacaagtggggcagtttatgaagttt
gaagatctctcagaaacctcatcagggaacggcagtgtcacttcagctgagagtatccca
tttccagagctccctaagttgcataagaatgtccagggttccatgttcttctgttga
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