Prunus mume (Japanese apricot): 103329211
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Entry
103329211 CDS
T03196
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103329211
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103329211
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
103329211
NCBI-ProteinID:
XP_016648989
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Position
LG4:complement(16764220..16765804)
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AA seq
404 aa
AA seq
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MAGDWIFVFLLLASIAKVQSSVFDVTSAAYGGKPNSDITQALANAWRDACASTWPTKVVI
PKGTYNLRGAILQGPCKAPIEVQVQGNLKAPLDSKYLTKQDTWVGFQYVDRLTLYGGGSF
DGQNNCYKNKYCKATDAINLRLDFVTNAMIRDITSLDSKHFHINVFGCRNVTFQYVTITA
PEDSANTDGIHIGRSYGITIDHTTIGTGDDCISLGDGSQRIIVTNVTCGPGHGISIGSLG
KYQSEVPVAGVLVKNCTLTNTQNGLRIKTWPGSPAFGTATHIHFQDIAMVNVGNPIFIDQ
QYCPYSQCAQKAPSTVQISSVSFVNIKGTSATPVAVQLMCSRKLPCQNVGLEDIDITYSG
DKGPLTSQCAYVKPQFTRVANPLSCATNPFSLRSRRNPANVLSR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgattggatatttgtgttcttattgttagcttctatagctaaagtacaatcc
agtgtcttcgatgtgacaagtgcagcatatggaggaaagccaaactctgacattacccag
gctttggccaatgcttggagagatgcttgtgcatcaacatggccaactaaagttgttatt
ccaaaggggacatataatttgagaggagcaattttgcaaggtccttgcaaggctcctatt
gaggttcaagttcaaggcaacctcaaggctccattggacagcaaatatctcacaaagcag
gatacttgggttggttttcaatacgtggacaggctcaccttatatggcggtggaagtttt
gatggccaaaacaattgctataaaaacaaatactgcaaagctactgatgctattaatctg
aggttggatttcgtcacgaatgccatgattcgtgacataacttctcttgacagcaaacac
ttccacatcaatgtttttggatgtcgcaatgtcacattccaatatgtcaccatcacagcg
cctgaagatagcgcaaacacggatggaattcatatcgggcgctcatatggtatcaccatc
gaccacacaaccatcggcacaggggatgattgcatctctcttggtgacggaagccagcga
atcatcgtgaccaacgttacttgtggaccaggccacggtataagcatcggaagtctagga
aaataccaaagcgaagtccccgtggccggagtactagtcaagaactgcaccctgactaac
acacaaaatggtctgagaatcaaaacatggcctggctcccctgcatttggcactgccaca
catattcactttcaagatattgccatggtcaatgtaggaaaccctatcttcattgaccaa
cagtattgcccatatagccagtgtgcacagaaggctccatctacagtccagatcagcagc
gtcagcttcgtcaacattaagggcacttctgccacaccagttgctgtacagcttatgtgc
agtagaaaattaccatgccagaatgtagggttggaagatattgatatcacttacagtgga
gacaaagggcctcttacctctcaatgtgcttatgtgaagcctcagtttactcgagtggca
aatcctctttcttgtgctaccaatccttttagtctgagaagtagaagaaatcctgctaat
gttctctctagatag
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