Prunus mume (Japanese apricot): 103329218
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Entry
103329218 CDS
T03196
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103329218
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103329218
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103329218
Enzymes [BR:
pmum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
103329218
Amino acid related enzymes [BR:
pmum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
103329218
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103329218
Prokaryotic type
103329218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
pre-PUA_NIP7
CEP19
Pannexin_like
Motif
Other DBs
NCBI-GeneID:
103329218
NCBI-ProteinID:
XP_008229866
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All DBs
Position
LG4:complement(16842699..16847295)
Genome browser
AA seq
672 aa
AA seq
DB search
MLILQRMATSSSFLSTPLLKSSSSFPTHFLSPLKHCVSAPSTEFRALALYRNRNGVSTSS
AAVATETQVSTQDNKLKETQKEKSDKLEKVVLPTNESSESLLRIRHTCAHVMAMAVQKLF
PDAKVTIGPWIENGFYYDFDMEPLTDKELKRIKKEMDRIIGRNLPLIREEVSRDEAQRRI
TALNEPYKLEILDSIKEDPITIYHIGNEWWDLCAGPHVEYTGKINRKAVELESIAGAYWR
GDEKKPMLQRIYGTAWESEDQLKAYLHFKEEAKRRDHRRLGQVLDLFSIQNDAGGGLVFW
HPKGAIVRHVIEDLWKKIHIERGYDLLYTPHVAKADLWQISGHLDFYKENMYDQMNIEDE
LYQLRPMNCPYHILIYKRRPHSYHDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAH
IFCLEDQIKDEIRGVLDLTEELLLQFGFSKYEVNLSTRPEKSVGDDDIWVKATSALRDAL
DDKGWSYQIDDGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDSNSEKK
RPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQAHVLPVTDTQLDYCKEVTNKLKAN
GIRGELCHGERLPKLIRNSEMLKIPLMAVVGAKEVETGTVTVRSRFGGDLGTMAIDDFVS
TIKSAIESRASI
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgttaattcttcagagaatggccacttcttcttctttcctttcaacccctctcctaaag
tcttcttcttcttttcccacccatttcctttcccctcttaaacactgcgtttcagcaccc
agcacagagttcagggctcttgctctttacaggaacagaaatggagtctccacgtcttcg
gcggctgtggctacggagactcaggtttcgacccaagacaacaaattgaaggagacccag
aaggagaaatctgataagctagagaaagtcgtgcttccaaccaacgagtcctctgagagc
cttctcagaattcgccacacgtgtgcacacgtgatggccatggctgttcaaaagctcttc
ccagatgcaaaagtgacaattggtccgtggatagaaaatgggttttactatgattttgat
atggagcctttgacagacaaagagttgaagagaatcaagaaggagatggatcgcatcatt
ggtagaaatttaccacttataagagaagaagtttcaagagatgaagctcagagaagaata
actgctctcaatgaaccatacaaattggaaattttggatagcattaaggaagatcccatt
accatatatcatattggtaatgaatggtgggacctatgtgcgggacctcatgttgaatat
actggaaaaattaacagaaaagctgttgaacttgagtctattgctggtgcttactggaga
ggggatgaaaagaaacccatgctgcagaggatctatggaactgcatgggagagtgaagat
caattgaaggcatatcttcatttcaaagaggaagctaaacgtcgagatcacaggcgcctt
ggtcaagtacttgacctgttttctatacagaatgatgctggtgggggtttagtgttctgg
catccaaagggtgccattgtgaggcatgtaatagaagatttgtggaaaaagatccacata
gaacgtggttatgatctgctgtatactccacatgttgcaaaggcagatctttggcagata
agtggtcatctggatttctacaaagagaatatgtatgatcagatgaatattgaggatgaa
ctttatcaacttcgaccgatgaactgcccctatcacatcttgatttacaagaggaggcct
cactcttatcatgattttcctattcgagttgctgagttgggaacagtatatagatatgag
ttatctggaagcttacatggcctttttcgtgtaagaggttttactcaggatgatgcacac
atcttttgtctagaagatcagattaaagatgaaatcaggggtgtcctagatcttaccgaa
gaacttttactgcaatttggcttcagcaaatatgaagtcaatctctctacgaggccagag
aaatctgttggagatgatgatatatgggtgaaagcaacatctgccctcagagatgctttg
gatgataagggttggagctatcaaattgatgatggtggtggtgccttttatggtcccaag
attgatcttaagattgaagatgctcttggaaggaagtggcagtgctcaactatacaggtt
gattttaacctaccacagcgttttgacataacatatgttgactcaaactcggaaaagaag
cggcctataatgattcatagagctgttcttgggtccttggagcgtttctttggagtcctt
atagagcattatgctggggattttccattatggctttcaccagtacaagctcatgtttta
ccagttactgacactcagcttgattattgcaaagaggtaaccaacaaactgaaagcaaat
ggtattcgcggtgaactttgccacggtgaacgcctgccaaaactgattagaaattcagag
atgctgaaaatcccattgatggctgttgtcggtgccaaagaagttgaaactggcactgtt
accgtaagatccaggtttggtggggatcttggcaccatggcaattgatgattttgtcagt
acaatcaagtcggccattgaaagcagagcgtcaatttga
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