Prunus mume (Japanese apricot): 103329223
Help
Entry
103329223 CDS
T03196
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103329223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103329223
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103329223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
103329223
NCBI-ProteinID:
XP_008229871
UniProt:
A0ABM1LPH6
LinkDB
All DBs
Position
LG4:complement(16868560..16873885)
Genome browser
AA seq
476 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSTFGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
DSVIMEKHNIDGRMVEAKKAVPRDDQNILGRSSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPIGGYNYGLSRVNSFLNGYTQGYTPNTVGGYGLGRFSPVAGGRSGFP
PFNSGYGMGMNYEPGLNPGFGGNTNFNSNISYPRGVSPYYINNSNRFSSPVGYDGGNGGN
TSSFFSSVTRNLWGNGGLNYGTNSQSSSAYMGSGSGTIGGSTFGNTGVNWRSSAISAQGG
GNNVSNNSGNLGYGVGDNSYGLGTGGYGRNSGTSVAPSSSFAASNGGFDGSFSDFYNGNS
VYGDPTWRSSNSEREGSVPFGYGLGGATSDVSAKSSPGYVGGYSVNKRQSNTGIAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatagtggtaagttatttattggcggcatatcttgggacacaaatgaagag
cgcctgaaagagtatttcagtacttttggagaggtggtagaagcagtgatcatgaaggat
cggaccacaggccgtgctcgtggtttcggttttgtagtttttgctgacccagcagtggca
gacagcgtcataatggagaagcacaacatcgatggaaggatggttgaggccaaaaaggct
gttcccagggatgaccagaacattttgggtagaagcagtggcagcatccatggttctcca
ggtccaggccgcacaagaaagatttttgttggaggtttggcatccactgtcacagagagt
gacttcaagaagtactttgaacagtttgggacaatcactgatgttgtggtgatgtatgat
cacaacacccagaggccgagaggctttgggttcatcacttatgattcagaggaggcagtg
gacaaggttttgcttaagacatttcatgaactgaatgggaagatggttgaagtcaagcgt
gcagttcctaaagagttatcacctggtcccagtcgcagccctattggaggatacaactat
ggtctgagtagagtcaatagcttccttaatggctacactcagggatatactccaaataca
gttggaggctatgggcttggtaggttcagtccagttgctggtggtcgaagtggatttcct
ccatttaattctggttatggaatgggtatgaattatgagccagggttgaacccaggtttt
ggaggaaatacaaactttaatagtaatatcagctacccacggggagtgagtccttattat
atcaataattcaaatagatttagcagtcccgttgggtatgatggtggtaatggaggaaac
acatcatctttttttagctcggtgactcggaacttgtggggcaatggggggcttaattat
ggaacaaattctcaaagttccagtgcttacatgggatcaggaagtgggaccattggagga
agtacgtttggcaatactggagttaattggcgttcttcagcaatttcagctcaaggtgga
ggaaataatgtttctaacaatagtgggaatcttggttatggagttggtgataacagttat
ggtttgggaaccggaggttatggaagaaacagtggtacaagtgtggccccttcatcttca
tttgctgcgtcaaatggtggtttcgatgggtccttctctgacttttacaatggtaattct
gtttatggagatcctacttggcgatcatcgaattccgagcgagaagggtctgttcccttt
ggttatggtcttggcggtgcaacttctgatgtttcagctaaaagttcgcctggttatgtt
ggtggttatagtgttaataagagacagtcaaacacaggaattgctgcctag
DBGET
integrated database retrieval system
