Prunus mume (Japanese apricot): 103329324
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Entry
103329324 CDS
T03196
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103329324
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103329324
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103329324
03036 Chromosome and associated proteins [BR:
pmum03036
]
103329324
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103329324
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103329324
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103329324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
103329324
NCBI-ProteinID:
XP_008230000
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All DBs
Position
LG4:complement(17637844..17641455)
Genome browser
AA seq
541 aa
AA seq
DB search
MIKQILGKIPRKPSKSSQNDAYNDGGANGNGPNSFHSSKSTSSSSKSSNLGSGASRSSNG
TLGPHSSSSTKSNHSKKSAPIAAQLGPLLSSGAYEALPSFRDVPSSERQNHFIKKLNMCC
VVFDFNDPSKNLKEKDIKRQTLLELVDYISSVTSKFNEVAMQEITKMVAANLFRTFSSSN
PDNKLPEMYDQDEEDQMMEPAWPHLQIVYEFLLRFVASPETDAKLAKRYIDHSFVLRLLD
LFDSEDQREREYLKTILHRIYGKFMVHRPFIRKAINHIFFWFIFETEKHNGIAELLEILG
SIINGFALPLKEEHKLFLVRALIPLHKPKCVSMYHQQLSYCISQFVEKDAKLADTVIRGL
LKYWPITNSSKEVMFLGELEEVLEATQASEFQRCMVPLFRQIGHCLNSSHFQVAERALFL
WNNDHIRTLITQNRQVILPIIFPALEKNTRSHWNQAVQSLTLNVKKIFADIDQELFDECL
LSFQEDESKEKETQDKRESTWKRLEDVATSKALGNEAVLVSRFASSVAIATNPKPRATSG
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacagatattgggtaaaatacctcggaaaccctcaaaatcatcgcaaaacgat
gcgtataatgacggaggggccaatgggaatgggcccaattcatttcacagctcaaaatct
acttcgtcttcatcaaaatcttccaacttgggttcaggcgcttcacgctcgagcaatgga
actcttggcccacactcatcgagctcgactaaatccaaccactcgaagaaatcagctccc
attgctgcccaattgggtcctttgttgtcttctggagcctacgaggctttgccgagcttc
agggatgttcccagttcagaaaggcagaatcattttattaagaaattgaatatgtgctgt
gttgtgtttgattttaatgatccctcgaagaatctcaaggagaaggacatcaagcggcaa
actttgcttgaacttgttgattacatttcatccgtaacttcaaagttcaatgaggtggca
atgcaggagattacaaagatggtggcagccaatttgtttcgtacattttcatcttctaat
cctgataacaagcttcctgaaatgtacgaccaagacgaagaggaccaaatgatggaacca
gcttggcctcatcttcagattgtgtatgaatttctattgagatttgtggcttcgccagag
acggatgccaagcttgctaaaagatacattgaccattcgtttgtgttgagactactggat
ttgtttgactctgaggaccaaagagagagagaatacttaaagacaatcctccaccgcatt
tatgggaagttcatggtgcatcgaccattcattaggaaagccatcaaccatatcttcttt
tggttcatttttgagactgagaagcacaatgggattgcagaattgcttgaaattttaggc
agcataatcaatggtttcgcgttgcctttgaaggaagagcacaagctgttccttgtccgt
gccttgattccccttcataagcccaagtgtgtatctatgtaccatcagcaactttcatat
tgcatcagtcagtttgtggagaaagatgccaagctggctgatactgtgattcgaggactg
ctgaagtattggcccataactaatagttcgaaggaagttatgttccttggtgaactagaa
gaagttctggaagctacccaggcatcagaatttcagcgctgtatggtccctctattccgt
caaattggtcactgcctcaacagctcacattttcaggtagctgagcgtgccttgtttttg
tggaacaatgatcacataagaactttgattacacagaatcgtcaagtgattctgccaata
atcttcccagctttggaaaaaaacacacggagtcattggaaccaagctgttcagagtttg
acattgaatgtgaaaaagatattcgcagatatcgaccaagaactctttgatgagtgcttg
ctcagtttccaagaagatgaatctaaagagaaagaaacacaggacaaacgtgaatcaacc
tggaagcgtttagaagatgtggctacctccaaggctttgggcaacgaggctgtgcttgtc
tcaagatttgcctcctccgttgccattgctactaacccaaaaccacgggctacttcaggt
agttga
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