Prunus mume (Japanese apricot): 103329422
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Entry
103329422 CDS
T03196
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103329422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103329422
03036 Chromosome and associated proteins [BR:
pmum03036
]
103329422
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103329422
Coactivators
SAGA/TFTC/STAGA complex
103329422
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103329422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
103329422
NCBI-ProteinID:
XP_016646790
LinkDB
All DBs
Position
LG1:10608032..10617180
Genome browser
AA seq
929 aa
AA seq
DB search
MDPSIVKKLLEDDEDETMHSGADLLAFQAALNKDIEGDVSASQPSDSDTAVLSQGSNNTS
SQSLLQLSTASQDENTAGQIQQDQKIAQHRELHLYEMEPKQQGSIAENMQQENDASKVLN
HFPLPQKQPLGDLQGQAEQKPLQIXXXXXMPISEKHPSSAEEHGIAPNLKSESQYLKLQK
MSSQQSMITKQPRNPSNQSRQVVFYQLYPLLLPQLNKDRGRQLTTLFGRLKSRQIHKDAF
VRELKSIVGDEMLRMAVKEVPLMPSPNHRLLPKALVQQQPPRMLSISACAAQLTNPRSSA
LHLRGPNSATDPSHSLPSTVQVQTDSSHLLIKNSARKLPEAECHSDSEGMQVSQISSSSV
VATNQERECFSVPMHGNASGTCHPFSGTNVNTCALPVKPQPSDAQLRQVLQHQSIGSTQS
GGEARVANIMSVSKTERQNSMNEPSRLQGGSLTHFTTNATLQQNPNPSQSSNKEQSSHPV
SSMAYVKQESIDQTAEQQHKPPLPSSHGLPSVSAWVLEQGNASSVISMDESLEKQPSRMG
VSSSPSSSTITVPQSSVSPSVMMQVNPSVSLGPRIISGTSPCGINNKTPPKKPSIGRKKP
LEALGSSPLQSSKKQKVSGAFSDIEQLNDVTAVSGVNLREEEEQLFPGPMENSRASEGSR
KSVQEEERLILGKAPLQKKLAEIMVKCGLKSVTHDVERCLSLCVEERMRGLINNLIRLSK
QRVDAEKSRHHTITNSDVRQQIMDLNQKAREEWEKKQAEAEKIRRLNEPEVDNGVDGDEE
KDEGCPKSFKTNIEADGKLRTTAANVAARAAVGGDDMFSKWQLMAQARQKCEGEIDAASG
SQPGKDVNHKPTSTTGRIMKGSQEAEKGGGPAPVATAGPFRKSGRNQVIMPHTRMARTIS
VKDMIAALEREPQMSKSMLIYLLHERIQS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggatccatccattgtgaagaagctacttgaagacgacgaggatgaaaccatgcattct
ggggcggatttgttagccttccaggctgccctgaataaggacatagaaggagatgtgtct
gcttcccagccgtctgattcagacacagcggttttgtctcaaggaagcaataatacttct
agtcagtcattactgcagttgagtactgctagccaggatgaaaatacagctggtcaaatt
caacaagaccaaaaaattgcacaacatcgagaactgcatttgtatgaaatggaaccaaag
caacaaggatccattgctgagaatatgcaacaagaaaatgatgcctcaaaggtacttaat
cactttcctttaccccagaagcaaccacttggtgatcttcaaggacaggcagaacagaag
ccactccagattnnnnnnnnnnnnnnaatgccgatttctgaaaaacacccaagctcagca
gaggagcacggcatagcacctaatctcaaaagcgaatctcagtacttaaagcttcagaag
atgagcagtcaacaatcaatgatcacaaagcaaccaagaaacccttcgaatcaaagcaga
caagtagtattttaccagttatatcccctcttattgccccaactaaataaagacagagga
aggcaacttactactctatttggtagactcaagagccgtcaaatccacaaagatgctttt
gtccgggaacttaaaagtatagttggggatgagatgctcagaatggcagtaaaggaagtg
ccactaatgcctagtcctaaccatcggttactgcctaaggccttggtccagcaacaacct
ccaaggatgctatctattagtgcatgtgccgcacagttgactaaccctcgttcatctgca
cttcatctgagaggtcccaattctgccactgacccatcacacagtctcccttcaacagtt
caggtacagactgattcaagccatctgctcattaaaaatagtgctagaaaattgccagaa
gcagaatgtcactcagattctgagggaatgcaagtaagtcaaatttcttcctctagtgtg
gtagctaccaatcaagaaagggagtgcttctcagttcctatgcatggaaatgccagtggt
acttgtcacccgttttccgggacaaatgtcaatacttgcgcattgcctgtcaaaccgcag
ccttctgatgcacaactgagacaagtcctacaacatcaaagcataggttctactcagtca
ggtggggaagcacgtgtagcgaacatcatgagtgtgtccaaaacagagaggcaaaattct
atgaatgaacctagtagactgcaaggtggatctcttactcactttacaactaatgcaact
ttgcaacagaatcctaatccttcacaatcctcaaataaagagcagagttcccatcctgtg
tcatcaatggcttatgtcaaacaggaatcgattgatcagactgctgagcagcagcacaag
cctccattgcctagttcacatggattgccttcggtttctgcttgggtacttgaacaggga
aatgcatcgtctgtaatttcaatggacgagtccttagagaagcagccttctagaatgggt
gtttcatcatcgccttcatcatctacaatcacagtgcctcaaagttcggtgtctccttcc
gtcatgatgcaagtcaatcctagtgtctcgttaggccctcggataatctctggaacctct
ccttgtgggattaataataaaacacctccaaaaaagccttctattggccgaaagaagccg
cttgaagcacttggttcttcaccactgcaatcaagtaagaagcaaaaagtaagtggggcg
ttttcggatattgaacaactcaatgatgtcactgctgtcagtggagttaatcttagggaa
gaggaagagcagctgtttcctgggcccatggagaatagtcgagcttcagaaggctctcga
aaatctgtgcaagaagaggaaaggctgattttggggaaggctccactgcagaaaaaatta
gctgaaattatggtcaaatgtggtctgaaaagtgtaacccatgacgtggagcgatgcttg
tcactgtgtgtggaggaaagaatgaggggactaataaataatttgatccgactgtcaaag
cagcgggttgatgctgagaaatcaagacaccacactattactaactctgatgttcggcaa
caaattatggatctcaatcagaaagctagggaagaatgggagaaaaagcaggctgaggca
gaaaagatccggaggcttaatgagcctgaggttgacaatggagtcgatggagacgaggag
aaggatgaaggctgtcctaaatcatttaagacaaacatagaggcagatggcaaactgagg
acaacagcagcaaatgtcgctgcccgtgctgcagttgggggagacgacatgttctcaaaa
tggcaactcatggcacaagcccggcaaaaatgtgaaggtgagattgatgcggcatctggg
tcccagccaggtaaagatgtaaaccacaaacctacatcaacaactggaaggatcatgaag
ggcagtcaagaagcagagaaagggggtggtccggctcctgtcgctacagctgggccattt
agaaaatctggaaggaaccaagttatcatgcctcacacaaggatggctcgtactatatct
gtcaaggatatgattgctgccttggaaagggaacctcagatgtcgaagtctatgttgata
tatctgttgcatgagagaatccaatcctag
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