Prunus mume (Japanese apricot): 103329557
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Entry
103329557 CDS
T03196
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103329557
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103329557
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103329557
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
103329557
NCBI-ProteinID:
XP_008230268
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Position
LG4:18899444..18904101
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AA seq
632 aa
AA seq
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MCSDPYCTICSTCQSLKSAKQDNPKASRLFDPKIQIAFYGDAKGWFIRSISFLNQYIPGV
MNPHTKAIRQWNKFFVIACLMAIFLDPLFFFVLYAEQDNKCLRIKWYLTFIMVFFRTITD
FIHFLNMLLQFRLAYVAPESRVVGAGEIVDQPKRIALNYIHGKFLVDLFIVLPLPQIIIF
VVLPQYIQSSGANDAKNLLRMAVLFQYIPRLYRFLPLLAGQSPYGFVFESAWTNFIINLL
TFMLAGHIVGSCWYLFGLQRVNQCLRNACHASEIPHDLCMRFIDCGFGRIFTSEPAWDNW
KNNGRANACFDEDGFSYGIYTKAVKLTTADTVTSYVYSLFWGFQQISTLAGNQVPSYFVW
EVLFTMAIIGLGLLLFALLIGNMQNFLQSLGRRRFEMLLRRRDVERWMSYRHLPEELRRQ
VRQAERYNWSATRGVNEEMLLENLPEDLQRDIRRHLFKFVKKVRIFALLEDPVLDAICEK
LKQKTYIKGSKIFYPGGLVEKMVFIVRGRVESIGEDGIVVSLCEGDVCGEELLTWCLEHP
SVNNVRIPGRKLLSNRMVRCLSNVEAFSLRAADLEEFTSRFARFLQNARVQGAIRYESPY
WRGLAAKRIQVAWRYRKKRLSRASFPRSSRLH
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtgatccttactgcacaatttgctcaacatgtcagagtttgaaatctgctaag
caggataatcccaaagcttcaaggctttttgatcctaagatccagattgctttctacggc
gatgctaaaggctggtttataagatctatctcttttctaaatcaatatattccaggagtc
atgaatcctcatactaaagccatacgacagtggaacaaattctttgtcatagcttgtttg
atggcaatttttctagaccctttgtttttcttcgtgttatatgcagaacaggataataag
tgtctacgtatcaaatggtacttgaccttcataatggtgtttttcagaacaataactgac
tttattcactttttgaacatgcttcttcagtttaggttggcttatgtggctcctgagtct
agagtggttggtgcaggagagatagtggaccaaccaaagagaattgctctcaattatatc
cacggaaaatttctggttgacttatttattgttttgccacttcctcaaatcataattttt
gtagttttgccacaatacatccaatcatctggagcaaatgatgcgaagaatcttctacgt
atggcagtgctttttcagtacattccaaggttgtataggtttctacctctgcttgctggt
caatctccatatggcttcgtatttgagtcagcatggacgaattttataataaaccttctc
actttcatgttggctggccacattgtcggctcctgctggtacctctttggcttacagagg
gttaatcaatgtcttcgaaatgcctgccatgcctctgaaatcccccatgacttgtgcatg
agattcatagattgtgggtttggtagaatttttacatccgagccagcgtgggataactgg
aaaaataatgggagggctaatgcttgttttgatgaagacggtttctcctatggaatctac
actaaagctgtcaagctcactacagcagataccgtgactagctatgtatactcattgttt
tggggattccagcaaatcagcactctggcaggaaatcaagttccaagctactttgtttgg
gaagtcctttttaccatggcaattatcggactgggcctcttgctctttgctcttctaatt
ggaaatatgcagaattttcttcaatctcttggacggaggagatttgagatgttgttgcga
cgccgtgatgttgaacggtggatgagctatcgccacttgccagaagaactgagaagacaa
gtaaggcaagcagaacggtataattggtctgcaactagaggtgtaaatgaagaaatgctt
ttggagaatttgcctgaagaccttcaaagagatataaggcgccatctcttcaaatttgtg
aaaaaagttcggatttttgccctgctagaagatcctgtcttagatgcaatttgtgagaaa
ctaaaacaaaagacatacatcaaaggaagcaaaatcttttatcctggaggcctggtcgag
aagatggtttttattgtgcgcggaagagtggagagcattggggaggatgggattgttgtt
tccttatgtgaaggggatgtctgcggtgaagaacttctcacatggtgtctagagcatcct
tcagtaaacaatgtcaggatccctggtcggaaattgttgagcaacaggatggtaaggtgc
ttgagtaacgtagaagcattttcactccgagctgcagacctggaagaattcaccagtcgt
tttgcaagattcttacagaatgcacgagtgcaaggagccataaggtatgaatcaccctat
tggagaggtcttgcagcaaagcgaattcaagtagcatggagataccggaagaagcgtcta
agtcgtgcaagcttccctcgctcctctcgcctgcattaa
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