Prunus mume (Japanese apricot): 103329756
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Entry
103329756 CDS
T03196
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103329756
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103329756
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Gifsy-2
Motif
Other DBs
NCBI-GeneID:
103329756
NCBI-ProteinID:
XP_008230481
LinkDB
All DBs
Position
LG4:20448721..20450563
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AA seq
405 aa
AA seq
DB search
MAGFSLLLIFLIITCFLTATFVSSSQLHDPELVAQEVHRSINASRRNLGYLSCGTGNPID
DCWRCDPNWEQNRERLADCAIGFGKDAIGGKNGRIYVVSDSGDDDPVNPRPGTLRHAVIQ
DEPLWIIFKRDMVVQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHD
CKQAGNGNIRNSPEHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCHDGLIDAIHGSTAIT
ISNNYMTHHDKVMLLGHSDSYTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSAAPTINSEGNRFLAPNTRFNKEVTKHEDAPESEWRGWNWRSEGDMMLNGA
YFRQSGAGASSSYARASSLSARPSSLVGSITTTAGALICRKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctgggttctcgcttttactgattttcctcatcatcacttgcttcctaactgcaact
tttgtttcctcctcacaacttcatgaccctgaactagtagcacaggaagtccataggagc
atcaatgcttctaggaggaacttgggctacttgtcatgtggaactggcaaccccatagac
gattgctggaggtgtgatcccaactgggaacaaaaccgagagcgcttagccgactgcgcc
attgggttcggcaaggacgccatcggaggaaaaaacggtcgaatctacgtagtcagcgac
tctggggacgacgacccagtgaaccccagacccggaaccctaagacacgcagtgatccaa
gacgagccattgtggattatattcaaaagggacatggtggttcagctgaagcaagagctt
gtcatgaactcgttcaagaccatcgacggtagaggagcgagcgtccacatagccggaggg
ccatgcatcaccattcattatgccaccaacatcattatccatggcatccacatccacgac
tgtaagcaggcggggaacgggaacatacgaaactcgccggagcattcaggttggtggacg
atatcggacggcgatggggtgtccatatttggtgggaaacatatatgggtggaccattgc
tctctctctaattgccatgatggcctcattgatgccatccatggatccacagccatcacc
atatccaataactacatgacccatcatgataaggtcatgcttttggggcacagcgattcc
tatacgcaagacaagggcatgcaggtcacagttgcctttaatcattttggagaaggcctt
gtccaaagaatgccaaggtgtagacatggatattttcatgtggtgaacaatgactacaca
cactgggaaatgtatgcaattggagggagtgcagctccaactatcaacagcgaaggcaat
agatttctggcgcctaatacacgtttcaataaagaggtaactaaacatgaggatgcacca
gagagtgagtggaggggttggaactggaggtcagagggggatatgatgttgaacggggca
tatttcaggcaatcaggagcaggagcatcttcaagctacgctagggcttcaagcctcagt
gcaaggccttcttctctggtgggctccatcacaactactgccggtgcccttatctgcagg
aagggatcccgctgctaa
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integrated database retrieval system
