Prunus mume (Japanese apricot): 103329840
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Entry
103329840 CDS
T03196
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103329840
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103329840
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
103329840
NCBI-ProteinID:
XP_008230581
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Position
LG4:20950561..20953244
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AA seq
511 aa
AA seq
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MMITFKLRSLTFFVFIAFSIWCSSLLEPCDARKGGKQYWRQNKGASAPASAFRKEQKGYG
GNHQRHQAGPRVSTTPSRGDNYITPEETAAKLLKNSGGNSNVFNVLDYGAKGDGKADDTK
AFETAWAAACKVQASTINVPSGSVFLVKPISFSGPNCEPNIVFQLDGKIIAPTSSGDWGS
GLLQWLEFTKLKGISIKGKGVIDGQGSVWWSDSPTYNIPADQTYSSSQDTVIESDSGKMP
STKPTALRFYGSDGVSVTGITLQNSPQAHLKFDACTNVQVSDISISSPGDSPNTDGIHLQ
NSQDVVIFGTSIACGDDCISIQTGCSSIYVHNVNCGPGHGVSIGGLGKDNTRACVSNVTV
RDVKMHNTLTGVRIKTWQGGSGSVQNIMFSNIQVSEVATPIMIDQFYCDKSKCQNETSAV
AISGVNYVNIQGTYTTKPVHFACSDSLPCTGVSLDTIQLKSVDEGKQLYGPFCWEAYGEL
KTSTVPEIDCLKKGKPSSSSTVARSESSNSC
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcacatttaaactaagaagcctcacattctttgttttcattgccttttctatt
tggtgttcaagcttgttagaaccttgtgatgctagaaaaggaggcaagcagtactggagg
caaaacaagggcgcctctgcccctgcctctgcattcaggaaggaacaaaagggttatggc
ggcaatcaccaacgccaccaggcaggccctagggtgtctacgacaccgtcaaggggagac
aattacatcacaccagaggaaactgcagcaaaactgctaaaaaacagcggtgggaattcc
aacgtctttaatgtgttggactatggtgctaaaggcgatggaaaagcagatgataccaag
gcttttgaaacagcgtgggcagcagcttgcaaagtgcaggcatcaactataaatgttcca
tccgggtccgtgttcctcgtcaaaccaatctctttttctggccctaattgtgaaccaaat
attgtatttcagttagatggcaaaatcatagctccaacaagctcaggagattggggttca
ggtcttctacaatggctcgaattcacgaagctaaaagggatttcaatcaaaggcaaagga
gtaattgatgggcaaggctcagtttggtggagtgactcacccacatacaatattcctgca
gatcagacatatagcagttcacaggacacggtcatagaaagtgacagtggaaaaatgcca
agcaccaaaccaacagctcttaggttctatggaagtgacggcgtgagtgtcactggtata
acacttcaaaacagccctcaggctcacctcaagttcgatgcctgcacgaatgttcaggtt
tctgatataagtatttcctcccctggtgacagccccaacacagatggaatccacctccaa
aactctcaggatgttgtcatttttggcaccagtattgcttgtggggatgactgtatatcc
atacaaactggatgctcaagtatatacgtacacaacgtgaattgtggacccggccatggc
gtcagcatcggagggctagggaaggataacactagagcttgtgtatccaacgtcacagtc
cgagatgtaaaaatgcacaatacactcactggcgtcagaataaagacctggcagggagga
tcagggtcagtccaaaacatcatgttttcaaacattcaagtatcagaagttgcaacccca
atcatgattgaccaattctactgtgacaagagcaaatgccaaaatgagacatcagccgtg
gcaatttcgggtgtaaattatgtaaacatacaaggaacctatacgacgaaacctgtacat
tttgcatgcagtgacagcttaccgtgtactggtgtgtctctggacaccatacagctgaaa
tcagttgatgaaggcaagcaattgtatggccctttctgttgggaggcgtacggagagctc
aaaactagcacagtccctgaaattgactgcttgaagaaggggaagccatcttcaagcagc
acagtagctcggtctgaaagtagtaattcttgctaa
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