Prunus mume (Japanese apricot): 103329938
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Entry
103329938 CDS
T03196
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103329938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmum02000
]
103329938
04147 Exosome [BR:
pmum04147
]
103329938
04090 CD molecules [BR:
pmum04090
]
103329938
Enzymes [BR:
pmum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103329938
Transporters [BR:
pmum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103329938
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103329938
CD molecules [BR:
pmum04090
]
Proteins
103329938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
Zeta_toxin
ABC_ATPase
AAA_22
AAA_30
RsgA_GTPase
AAA_21
AAA_15
AAA_23
SpoIIM
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
103329938
NCBI-ProteinID:
XP_008230690
LinkDB
All DBs
Position
LG4:complement(21479094..21484286)
Genome browser
AA seq
1251 aa
AA seq
DB search
MGQKGPPSGRDSGKKVGSIRSVFMHADGVDKCFMILGLFGSLGDGFSTPLVLLITSRLMN
NIGGSSTSAQDDFLHNINKNAVALLYLACGSFVCCFLEGYCWTRTGERQAARMRVRYLKA
VLRQDVGYFDLHVTSTSEVITSVSNDSLVIQDVLSEKLPNFLMNASMFSGSYVAAFIMLW
KLAIVGFPFVVLLVIPGLMYGRTLMGLARQIREEYNKAGSIAEQAISSIRTVYAFVGENK
TISEFSAALQGSVKLGLNQGLAKGLAIGSNGVVFAIWSFMSYYGSRMVMYHGAQGGTVFA
VGASIAVGGLALGAGLSNLKYFSEASSAAERIMEVIRRVPKIDSDNMEGEILGEVSGEVE
FKHVEFAYPSRPESIIFKDFNLTVPAGKTVALVGGSGSGKSTVISLLQRFYDPLGGEILL
DGVAINKLQLKWLRSQMGLVSQEPALFATSIKENILFGKEDAEIEQVIDAGKAANAHNFI
SQLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERVVQEAL
DKAAVGRTTIIIAHRLSTIRNADVIAVVQNGQVMETGSHDELSRIEDGHYTSLVRLQQTE
KQKGPEELGSSSISNDIHNTSSRRLSLVSRSSSANSFAQGRASSLAGDQENMEEFDQQKL
PVPSFRRLLALNLPEWKQAILGCLSATLFGAVQPAYAFAMGSMVSVYFLTDHDEIKAKTR
TYALCFLGLAIFSLLVNVCQHYNFAYMGECLTKRVRERMLSKILTFEVGWFDQDENSSGA
ICSRLAKDANVVRSLVGDRMALVVQTISAVVVACTMGLVIAWRLALVMIAVQPLIIVCFY
TRRVLLKSMSRKAIKSQEESSKLAAEAVSNLRTITAFSSQDRLLKMLEKAQEGPRRESIR
QSWFAGIGLACSQSLTTVTWAFDFWYGGKLVAKGYVHAKQLFETFMVLVSTGRVIADAGS
MTTDLAKGSDAVGSVFAVLDRYTKIEPEDPEGLEPKRIVGHIELRDVHFAYPARPDVMIF
KGFSIKIESGKSTALVGQSGSGKSTIIGLIERFYDPIKGVVKIDGRDVKSYHLRSLRKHI
ALVSQEPTLFAGTIRENIVYGVSDKVDELEIVEAARAANAHDFIAGLKDGYDTWCGDRGV
QLSGGQKQRIAIARAILRNPVVLLLDEATSALDSQSEKVVQDALERVMVGRTSVVVAHRL
STIQNCDLITVLDKGKVVEKGTHSSLLSKGPTGAYYSLVSLQRTGPTQSVH
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaaaggtcctcctagtggtcgggacagtgggaagaaagttgggtctatccgg
tccgttttcatgcatgctgatggtgttgataaatgcttcatgatcttagggctctttgga
tcccttggtgatggattctcgacgcccttggtgttgttgatcactagccgcttgatgaac
aatattggaggttcatcaacttcggctcaggatgatttcttgcataacatcaataagaat
gcagtggcgctgttgtacttggcctgtggatcatttgtttgttgttttctagagggttat
tgctggacaagaacaggtgagagacaagcggctagaatgagagtcagatatttgaaagca
gtgctaaggcaagatgtgggctactttgatttgcatgtgacaagcacctcagaggttatc
acaagtgtctctaatgatagcctcgtgattcaagatgtcctcagtgaaaagctgccaaac
tttttgatgaatgcctcaatgttctctggaagctatgtggcggcctttataatgctgtgg
aagctagcaattgtgggatttccttttgtggtgcttttggtaattcctggtttaatgtac
ggaaggactttgatgggtttagctaggcagattagagaagagtacaacaaggctggatca
atagcagagcaggcaatatcttctatccgaacggtttacgcctttgtcggagaaaacaaa
accatctcagaattctctgcagctcttcaaggctctgtcaagttgggattgaaccagggc
ttggctaaaggcctagccattggaagcaatggcgtcgtcttcgccatttggtctttcatg
tcatattatggtagcagaatggtcatgtaccatggtgctcagggaggcactgtttttgct
gttggtgcttccatagccgttggtggattagcactaggtgctggtttatcaaacttgaag
tacttctcagaagcaagctcagcagcagagaggataatggaagtgataagaagggtcccc
aagatcgattcagacaacatggaaggtgagattttgggggaagtatcaggagaggttgaa
ttcaagcacgtagaattcgcctacccatcaagacccgaaagcattatcttcaaagacttc
aacttgacagtgccagcgggaaaaaccgtggccttggtgggcggcagtggctcgggaaag
tccacagtgatatcactgttgcagagattttatgatccacttggtggagagattcttctt
gatggggtggccataaataagctccagctaaagtggctgaggtcacagatgggtttggtg
agccaagagccggcgctgttcgcaaccagcataaaagaaaacatactttttggcaaggaa
gatgccgaaattgaacaagtcattgacgctggaaaagccgctaatgcccataatttcatc
tctcagctgcctcagggatatgatacacaggttggggagaggggtgttcaaatgtcagga
ggacaaaaacagaggatcgccattgcacgagccatcatcaagaaacctcgtatcctcctc
ctagacgaagccacaagcgcattggattctgaatccgagcgagtcgtccaagaagctctc
gacaaagccgccgtcggccggactacaatcatcatcgcgcaccgcctctccaccatccga
aatgccgacgtgatcgccgtcgttcaaaacgggcaggtcatggagaccgggtcgcacgac
gagctgtcccggatcgaagacgggcactacacgtcgttagtccgtctgcaacaaacagag
aaacaaaaaggaccagaggagttaggctcgtcgtctatttcaaacgacattcacaacaca
agcagtcgcaggctctccctagtgagccgttccagctccgctaactcattcgcgcaagga
cgagcctcgtcgctcgctggggatcaagagaatatggaagagtttgatcagcagaagctg
cccgtgccgtcgtttaggagactgttggctctgaacctgccggagtggaagcaggcgatt
ttgggttgtttgagcgcgactctgtttggtgcggtccagccggcgtatgcatttgcaatg
gggtccatggtttctgtgtatttcttgacggaccatgatgagatcaaggccaagacgagg
acttatgcgctgtgctttcttgggttggcaatcttctcgttgctggtcaatgtgtgccag
cactataactttgcctacatgggagagtgcttgaccaagagagttagagagaggatgctc
tcaaagattttgacatttgaagtcggttggtttgatcaggatgagaattccagtggcgcc
atttgctctaggctagccaaagatgccaatgtggtgagatctttggtgggtgatcggatg
gctctggttgtgcaaaccatctcagctgtggttgtggcctgcacaatgggtttggtgatt
gcatggaggctggccttggttatgatagccgtgcagccactcatcattgtgtgcttctac
actaggcgcgtcctgctcaaaagcatgtccaggaaggccataaaatcccaagaagaaagc
agcaagctcgcagccgaagcagtgtctaatctcagaaccatcaccgccttctcgtcccaa
gaccgcctattgaaaatgctcgaaaaggcccaagaaggcccccgcagagagagcatccgg
cagtcatggtttgcgggtatcgggcttgcttgctctcaaagcctgacgactgtcacttgg
gccttcgacttttggtacggaggcaagcttgtcgccaagggctatgtccatgcaaaacag
ctctttgagaccttcatggtcttggtaagcacgggcagggtcatcgcggatgctggtagc
atgaccacggacctcgccaaaggctcggatgctgtggggtccgtattcgccgtgttagac
cgatacacgaagatcgaacccgaagatcccgaaggtctggagcccaaaagaatagtgggt
cacattgagctacgcgacgtgcattttgcgtacccggctaggcccgatgtgatgatcttc
aaaggcttctcgatcaaaatcgaatcagggaaatcaacggcgttggtgggacaaagtggg
tcaggcaaatcaaccatcattggattaatcgagagattctatgatccaattaaaggggta
gtcaaaatcgacggtcgagatgtgaagtcttaccaccttagatcactgagaaagcacata
gcgttggtcagccaagagccaacgttatttgctgggactatacgcgagaacattgtatac
ggcgtgtcggataaagttgacgaattggagatagtggaagctgcgagggcagccaacgct
cacgatttcatcgccgggctcaaagacggatacgacacgtggtgcggagacagaggtgta
cagttgtccgggggtcaaaagcaacgcattgccatagccagagcgatattgcgaaacccc
gtcgttttgctgttagacgaggcaaccagcgcgcttgatagtcagtcagagaaggtggtg
caagatgctctagagagagtgatggtggggaggacgagcgtggtggtggcccacaggtta
agtaccatacaaaactgtgatcttatcactgtgcttgataaagggaaggttgtggagaaa
gggacccactcgtcgcttttgagtaaggggcctaccggtgcatattactcactggtcagt
ctccagaggaccgggcccactcaaagtgttcactaa
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integrated database retrieval system
