Prunus mume (Japanese apricot): 103330078
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Entry
103330078 CDS
T03196
Name
(RefSeq) chaperone protein ClpB3, chloroplastic isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pmum03110
]
103330078
Chaperones and folding catalysts [BR:
pmum03110
]
Heat shock proteins
HSP100
103330078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
AAA_14
IstB_IS21
AAA_18
Torsin
Zeta_toxin
AAA_7
TniB
AAA_28
Mg_chelatase
AAA_24
NACHT
ABC_tran
ResIII
NBD_SMAX1
KIF9
Motif
Other DBs
NCBI-GeneID:
103330078
NCBI-ProteinID:
XP_008230845
LinkDB
All DBs
Position
LG4:complement(22562203..22567637)
Genome browser
AA seq
981 aa
AA seq
DB search
MASATSFASGVGLPLPQSVSSKWCNKAAIFARPHLSLSFHARPGSFRALTSRQLSQNGAF
RTGLRRNSRSSRPFVVRCDASTGRITQQDFTEMAWQSIVSSPEVAKENKHQIVETEHLMK
ALLEQKNGLARRIFSKAGIDNTRLLEATDKYIQRQPKVLGESAGSMLGRDLEALIQRARD
YKKEYGDSFVSVEHLVLGFTQDQRFGKQLFRDFQISKETLKSAIESIRGRQSVIDQDPEG
KYEALEKYGKDLTAMAKAGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIS
EGLAQRIVQGDVPQALMNRKLISLDMGSLIAGAKYRGEFEDRLKAVLKEVTESEGQIILF
IDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQV
YVDQPTVEDTISILRGLRERYELHHGVRISDGALVEAAILSDRYISGRFLPDKAIDLVDE
AAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKERLNRLEAELSLLKEKQA
ELAEQWEHEKSVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLGGA
EKELDEYLKSGKSMLREEVTGNDIAEIVSKWTGIPVSKLQQSEIDKLLHLEDELHKRVVG
QDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRI
DMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTETVRRRPYSVILFDEIEKAHSDVFNVFLQ
ILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNADDDTMPKDLAYDTIKKRVMEAARS
IFRPEFMNRVDEYIVFQPLDRDQISRIVKLQLNRVQKRIADRKMKMKVSDAAIQLLASLG
YDPNYGARPVKRVIQQYVENELAKGILRGDFREEDTVFVDTEVTAFSNGQLPQQKLLFKR
LETDDSESPAAEKQEAFSETL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcgacctcctttgcttctggggtcggtcttcctcttccccaatcggtttct
tccaaatggtgcaataaagctgctatctttgctcgcccacacctctccctcagcttccat
gccagacccggatccttcagggccttaacttcgcggcaattgagccaaaacggtgcgttc
cgaactgggttgcggagaaatagtcggagttcgaggccttttgttgtgcgctgcgatgct
tcaactggaaggattacacaacaggactttacagaaatggcatggcaatcgattgtttcg
tctccagaagtggcaaaagagaacaaacatcagatagtggagactgagcatttgatgaaa
gcactcttggagcaaaagaatggccttgctcgtcgcattttctccaaagctgggatcgac
aatacccgtcttcttgaggcaactgataagtatattcaacgccaaccaaaggttcttggt
gaatctgcgggctcaatgttaggacgtgacttggaagccttgattcaacgagccagggat
tacaagaaagagtatggggactcattcgtctctgtggagcatttggttcttggtttcact
caagatcaacgatttgggaagcaattatttagagattttcaaatatccaaggaaactttg
aaatctgctatagaatccatacggggacgccaatcagttattgaccaagatcctgaagga
aaatatgaagcacttgaaaagtatggaaaggatctgacagctatggcaaaggcaggaaag
cttgacccagtaataggaagagatgatgaaatacgcaggtgcatccagattctctccaga
agaacaaagaacaacccggtgctgattggtgaaccaggtgttggaaaaactgcaatttcc
gaagggcttgctcaaagaattgtgcaaggggatgtcccacaagctttgatgaaccgtaag
ctaatatcccttgacatgggttcactaattgctggggcaaaatatcgtggggaatttgag
gataggctgaaggcagtacttaaggaagtaacagaatcagagggccagataatccttttt
attgatgagatccacacagttgttggggcaggtgctacaaatggtgcaatggatgctggc
aatctcttaaaacccatgcttggtaggggagagttgcggtgtataggtgcaacaacactg
gatgagtatcgtaaatacattgagaaagatccagcattggagcgtcgtttccagcaagtt
tatgttgatcagcctactgtggaagataccatttcaatactccggggactgcgtgaaaga
tatgagttgcatcatggagttcgcatttctgatggtgcactcgtggaagctgcgattctc
tcagaccgttacatcagtgggcgatttttacctgacaaagctattgacttagttgatgaa
gctgctgctaaattgaaaatggaaattacgtcaaagcccacagccctagatgagatcaac
cgttcagtgttgaaacttgaaatggagagactatctcttacaaatgatacagacaaagct
tctaaagagagactgaaccgccttgaggctgagttgtctctcttaaaagagaaacaagct
gagctggctgagcagtgggagcatgaaaaatcggtcatgactcgcattcagtcaatcaag
gaagagattgacagggtaaatcttgagatccagcaggctgaacgagagtatgatctcaac
cgggctgctgagttgaagtatgggagtctgaattctttgcagcgccaacttggtggtgca
gaaaaagagctagatgagtatctaaagtctgggaagtccatgctgagagaggaagttact
ggaaatgatattgctgaaatagtcagcaagtggactggtattcctgtttccaagttgcaa
caatcggagatagacaagctcttgcacttggaggatgagctgcataaacgtgttgtgggt
caggatcctgcagtgaaatcagtagctgaagctattcagcggtctcgagcaggtctctca
gatcctcatcgcccaattgctagtttcatgttcatgggccccactggtgttgggaagaca
gaactagctaaggcccttgcctcctacatgttcaacactgaagaagcacttgtaagaatt
gatatgagtgagtacatggaaaagcatgctgtttccagattgataggagctccacctggt
tatgtggggtatgaggagggaggacagctgacagagactgttcgccggaggccatattca
gttattttgtttgatgagatagagaaggcacattctgatgtgttcaatgtgttccttcag
attttagatgatgggcgagtaactgactcacagggtcgcactgtgagtttcaccaacact
gtcatcatcatgacctcaaatgtgggttcacagtacatactaaacgctgatgatgacacc
atgccaaaggacttggcttatgacactataaagaagcgggtaatggaagctgcaagatca
atatttcgacctgagttcatgaaccgagttgatgagtacatagttttccagcccttggac
cgcgatcagatcagccgtattgtcaagttacagttgaaccgagtgcaaaagagaatcgca
gaccgcaagatgaaaatgaaggtgagtgatgcagctatccagcttcttgcaagtctcgga
tatgatccaaactacggtgctaggccagtcaagcgggtgatacagcagtacgtcgaaaat
gagcttgccaagggcatcttgagaggagattttagggaagaagacactgtgtttgtagac
acagaggttacagcgttttcgaatggccaactcccccagcaaaagctattgttcaagagg
ctggaaactgatgattcagaatctccagctgcagagaaacaagaggctttctcagagact
ctatag
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