Prunus mume (Japanese apricot): 103330181
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Entry
103330181 CDS
T03196
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103330181
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103330181
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103330181
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
TssN
GalA_N
Motif
Other DBs
NCBI-GeneID:
103330181
NCBI-ProteinID:
XP_008230952
UniProt:
A0ABM0NWQ9
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Position
LG4:complement(21183831..21187676)
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AA seq
713 aa
AA seq
DB search
MNRIIATPASKFRPLHPNSNPNNADSSGVAIPVEEHPLQILWNHQVLDPDSDIVAHWNHV
FLVICIFALFIDPLYFYLPNVDGPACLSSNNELAVVVTCFRTFTDLFYLLHMIIKFRTAY
VNPSSRVFGRGELVMDPRQIAIRYLKSDFVVDLAATIPVPQIVIWLVIPATRNSRADHAN
STLALFVLTQYVPRIFLIFPLNQRIIKTTGVVAKTAWAGAAYNLLLFMLASHIVGAVWYL
SSIGRQFSCWRQECRRESESMIVSCLTSFLDCNSKELPERKYWLNVTKVVSNCDAENEKN
IKFKFGIFGDAFKNEVANSRFFEKYLYCFWWGLRNLSSYGQTLKTSTYLWEIMFSIVLCL
TGLILFSLLIGNMQTYLQSMSIKFEEWRIKQTDTEEWMRHRQLPEDLRERVRRFMQYKWF
ATRGVDEESILRSLPLDLCHEIQRHLCLNLVRRVPFFSQMDDQLLDAICERLVSSLSIQG
THIVQEGDPVTEMLFIIRGKLESSTTNGGRSGFFNSIALGPGDFCGEELLTWALMPSSSL
NLPSSTRTVRALTEVEAFALRAEDLKFVAGQFKRLHSKKLQHAFRYYSHQWRTWGACFIQ
AAWRRFKKRKMARDLAMQESFYYMQIPGQEEEGYYYYDEEQADGNYENNENGGRSGESTS
NTGSHIGVTFLASKFAANTKRGIAQKAQAVEAASTSLGMPRLFKPDEPDFSVE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaataatcgccacgccggcctctaaattccgccccctccaccccaacagcaac
cctaacaacgccgacagctccggcgtagccatcccagtggaagagcacccgctccaaatc
ctatggaaccaccaagtcctcgacccggacagcgacatcgtagcccactggaaccacgtc
ttcctcgtcatttgcatcttcgccctcttcatcgaccctctctacttctaccttcccaac
gtcgacggccccgcttgcttgtcctccaacaacgaactcgccgtcgtcgtcacctgcttc
cgcaccttcaccgatctcttctacctcctccacatgatcatcaaattccgtaccgcctac
gtcaatcccagttctagggttttcggccgcggcgagctcgtcatggacccccgccagatt
gccatccgctacttgaaatccgacttcgtcgtcgatcttgctgccaccattccagtcccg
cagattgttatctggttagtgattccggccaccaggaattcgagagctgatcatgccaac
agcactctggctctgttcgttctgactcagtatgttcctcgaatcttcctcatctttcct
ctgaatcagcgcatcatcaagaccaccggcgttgtggcgaagactgcgtgggcaggagct
gcatacaatctccttcttttcatgctagccagtcatatagttggagctgtgtggtatcta
tcgtccatagggcggcagttctcttgttggagacaggagtgtagaagggagagcgagtcc
atgattgtgtcttgccttactagttttctggattgtaatagcaaggagctaccagaacgg
aaatattggctcaacgtcaccaaagttgtttcgaattgtgatgcagagaatgagaaaaat
atcaaatttaagtttggaatctttggggatgctttcaagaatgaggtggcgaactcgcgc
ttctttgagaagtacttgtattgtttttggtggggtttaagaaacttaagttcatacggg
cagactttgaagacgagcacatatctttgggaaataatgttttccattgttctctgtctt
actggtttaattcttttctcactattgattggaaacatgcagacttatctgcaatcgatg
tcaataaaattcgaagaatggaggattaagcagacagatactgaggagtggatgaggcat
cgccaattacctgaggatttgcgagaacgtgtacgccgatttatgcaatacaaatggttt
gccacacgaggagttgatgaagaatccatattgcgctcattgcctttagacctctgccat
gaaatccagcgacacttatgccttaaccttgttcgtcgtgtcccttttttttcacaaatg
gacgaccagcttcttgatgccatatgtgaacgtcttgtctcatccttgagtatccaaggc
acacatatagttcaagagggtgacccagtaactgagatgttgtttatcattagagggaaa
cttgagagctccacaaccaatggagggaggtccgggttctttaactccatcgctcttgga
ccgggtgacttctgcggtgaggaactcttgacatgggccttgatgccaagctctagcctt
aatctgccttcttccactcggactgtgagagccttaaccgaagttgaagcttttgcactt
cgagccgaggaccttaaattcgttgcaggtcagttcaagcgccttcacagcaagaaacta
cagcatgcgtttaggtactattcccaccaatggaggacatggggtgcttgcttcatacaa
gccgcttggagaaggtttaagaagagaaagatggcaagggacttggctatgcaggagagc
ttctactatatgcaaatcccaggccaagaggaagagggttactactactatgatgaagaa
caagcagatggaaattatgagaataatgagaatggtgggagatcaggggagagtacaagc
aataccggctcgcatattggggtcacatttctggcttccaaatttgctgcaaatacgaaa
agagggattgcccagaaagctcaggcggttgaggctgcttctaccagtttggggatgcct
cgtttgtttaagccagatgaacctgatttctctgtagaatga
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