Prunus mume (Japanese apricot): 103330240
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Entry
103330240 CDS
T03196
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103330240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103330240
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
103330240
Prokaryotic type
Archaeal type
TFB
103330240
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
DUF5798
Motif
Other DBs
NCBI-GeneID:
103330240
NCBI-ProteinID:
XP_008231004
UniProt:
A0ABM0NWU3
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All DBs
Position
LG4:complement(22698981..22700112)
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AA seq
285 aa
AA seq
DB search
MENDSGFCSDCKAYTDVVLDHRSGDTICTECGLVLEERARSDPITDNGVLTVNVSNDNKK
AVSCALPRLHKTLRNPDKSLHIAFESLGVMADRLALVATIRDHAKEVYKKADNRKFCRGR
NCDAIMAACLFLACQEKGFPRTLKEIATVANGASRKEINRMKELLKKVLEVDSKTTNVGD
LSRRCCSRIGMANQDMKAVLETLNKSEEVDVRRSPQSALAAVMYMIAQLSNDKSTRDLTL
QDVSQAADVAVATTEKAYKDLYPYASRIIPNWFVKLEDLKKLCVP
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgacagtgggttttgttcagactgcaaggcatacacagacgttgtactcgac
caccggtccggtgacacaatctgcaccgaatgcggactggttcttgaagaacgcgctcgc
tccgaccctataacggacaatggtgttcttaccgttaacgtttcgaacgacaacaagaag
gctgtttcttgtgctcttcctcggctccacaagactctccgaaacccagacaagtctctc
cacattgcttttgagtcccttggtgtgatggccgaccggctagcactcgttgccacgata
cgagaccatgccaaagaggtgtacaagaaggccgacaatcgcaagttttgtcggggaaga
aactgtgatgctataatggctgcatgcctctttcttgcttgccaagaaaagggttttccc
cgaactctaaaggaaatcgcgacggttgccaatggtgcctcaagaaaagaaatcaacaga
atgaaagagctcttgaagaaagtactagaagttgattcgaagactacaaatgtcggggat
ctttcacggcggtgctgctccaggattggtatggcgaatcaagatatgaaggctgtgttg
gaaactctgaacaagtcggaagaggttgatgtaaggagaagccctcagtctgctttggca
gcggttatgtacatgatagctcagctctccaatgacaagtcaactcgagatttgactctt
caagatgtctcacaagcagctgatgttgcggtagcgacaactgagaaggcatacaaagat
ctatatccctatgcttcaaggataatacccaactggtttgtcaagttggaggacctcaag
aaactttgcgtcccttga
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integrated database retrieval system
