Prunus mume (Japanese apricot): 103330276
Help
Entry
103330276 CDS
T03196
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00600
Sphingolipid metabolism
pmum01100
Metabolic pathways
pmum04382
Cornified envelope formation
Module
pmum_M00094
Ceramide biosynthesis
pmum_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
103330276
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103330276
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103330276
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
103330276
Amino acid related enzymes [BR:
pmum01007
]
Aminotransferase (transaminase)
Class II
103330276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
103330276
NCBI-ProteinID:
XP_008231042
LinkDB
All DBs
Position
LG4:complement(23123183..23126900)
Genome browser
AA seq
489 aa
AA seq
DB search
MIAIPYLTALTTYFSYGLLFVFGQVRDVFRKFIDWWSSSNLQGYAPICLGLEDFYIRRLY
LRIQDCFNRPIASAPDAWFDVVERFSNDYNKTLKLTTKTSRCLNLGSYNYLGFAASDEYC
TPRAIQTLKKYSPSTCSSRVDGGTTVLHNELEKRVASFVGKPAAIVFGMGYVTNSAILPV
LMGKGRLIVSDSLNHNSIVNGARGSGASICVFQHNTPSHLEEVLREQIAEGQPRTRRPWK
KIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSEELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILG
EDGSNRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLK
QNVAVVTVAFPATPLLLARARICISASHTREDLLKALEVFGRVGDLVGIKYFPAEPKKLQ
EEERLLKLE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgatcccttatttaacagcgttaaccacgtacttcagctatggcttgcttttc
gtcttcggccaagtcagagatgtcttccgcaaattcatcgactggtggagttctagcaat
ttgcagggttatgctccaatctgtttaggacttgaagatttttatattcgtcggctgtat
cttcgtattcaggactgtttcaatagacctatagcaagtgctcctgatgcttggtttgat
gtggtcgaacgtttctccaatgactacaacaagacactcaaactaaccacaaaaaccagt
agatgccttaacttgggatcttacaattaccttggctttgctgcatccgatgaatactgc
acgcctcgtgctatccagacattgaaaaaatattctcccagtacctgtagtagccgtgtt
gacggcggcaccacagttttgcataatgaactggagaagcgtgtggcaagttttgttggg
aaacctgctgctatagtttttggaatgggctatgtcacaaactctgctatccttccagtc
ttgatggggaagggacgcttgattgttagtgattccttgaaccacaactccattgtcaat
ggtgcacgaggatctggagctagtatttgcgttttccaacacaatactccttctcatttg
gaggaagttttgagagaacaaatcgcagaggggcaacctaggacccgcagaccctggaag
aagataattgtaattgtggagggaatatacagcatggaaggggagctttgcaaacttcct
gagattatagccatctgcaagaaatataaggcatatacatatttggatgaggcccacagc
attggagcagtagggaaaacaggtagaggtgtttgtgagctcttgggagtagatacagct
gatgtagatatcatgatgggaacatttaccaaatcatttggatcatgtgggggatatata
gcaggatccgaggagcttatccaatacttgaagtacacttgccctgctcatctttatgca
acttcaatatcaccacctgctgcagaacaaataatatctgctataaaggtcattcttgga
gaggatggttccaatagaggtgcccaaaaacttgcacgaatacgtgagaatagcaacttt
ttcaggtcagaactacagaaaatgggatttgaggttttgggggataacgactctccagta
atgccaattatgctttacaacccagccaaaattcctgccttctcacgggagtgcctcaag
cagaatgtagctgttgtgacagtagcatttccagcaaccccgctgctattggcaagggca
cgtatatgcatatctgcttctcatacaagggaagacctgctcaaagcgttggaggtattt
ggcagggttggggatctggtgggtataaaatacttcccggcagaaccaaagaagctgcag
gaagaagaaaggttgctcaagttggagtga
DBGET
integrated database retrieval system
