Prunus mume (Japanese apricot): 103330303
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Entry
103330303 CDS
T03196
Name
(RefSeq) UPF0400 protein C337.03 isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103330303
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103330303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
CTK3
CREPT
Allexi_40kDa
P4Ha_N
DUF4140
TMF_TATA_bd
FGGY_C_2
Motif
Other DBs
NCBI-GeneID:
103330303
NCBI-ProteinID:
XP_008231072
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All DBs
Position
LG4:complement(23255063..23261252)
Genome browser
AA seq
514 aa
AA seq
DB search
MGSTFNPQILVEKLAKLNNSQASIETLSHWCIFHMNKARQVVETWARQFHSAPRDQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIESGDEFGRNAAQRLVGIWDERKVFGS
RGQILKQEFVGKHLENINRNGKHSGARLKQPAGTALDKIVSDYQVIYGQMDEDTILSKCR
NAISCLEKVDKEIGGDFNSGQFHGSAFVEEVQGQHAVLRDCIEQLTAVESSRANLVSHLR
EALQEQEFKLDQVRDQLQAAQSQSEQATNICHRLLNGNNMQSAAHQSSKEAHTSVAPHSF
MAVGREQSAPVMYTQQVPFPEKSGHVEDDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLA
SEGVISNPIKEPSGDYPPEKRPKLENDQSSSYVPQSSNPSPSPPIPHSNVPTTNQQYTPS
EAPPPPSSSPPPLPPLPPVPQYPVSQYMQGAVPYSYSMAQQQPPPSMPDYPAGAPVNGIS
PFMAPANSYPSFQASDGKFYNQQSSMQMTPISRQ
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtacatttaatccgcagattttagtggaaaagctagccaagctcaacaactcg
caagcaagcatagagactttatcacattggtgcattttccatatgaataaagcaagacaa
gttgttgaaacatgggctaggcaatttcattccgctccacgtgatcagagattggctttc
ctctatcttgcaaatgatattttacagaacagcaggcgaaaaggttcagagtttgttggt
gaattttggaaggttcttccagatgctcttcgtgatgtaattgaaagtggagatgaattt
ggaagaaatgcagcacaacgactggttggtatatgggatgagagaaaagtttttggctct
cggggtcaaattctcaagcaagagtttgtgggaaagcacctggaaaatattaatagaaat
gggaagcattcgggtgccagactgaaacagcctgctggaactgcattggacaaaatagtt
tcagattaccaagtcatatatgggcagatggatgaagacactatattgagcaaatgtagg
aatgctattagctgtcttgagaaggtagataaggaaattggtggtgatttcaattcaggg
caatttcatggatctgcatttgtggaggaggttcaagggcagcatgctgtactgagggac
tgtattgaacaactaacagcagtagaatcttcaagagctaatcttgtgtcgcacctgaga
gaagctcttcaggagcaggaattcaagttggatcaagtccgagaccaacttcaggctgca
caatcccagtcagagcaggccactaatatctgccatcggttattgaatggcaacaatatg
cagtcggcagcacaccagagctcaaaagaagctcatacctctgtagcaccccacagcttt
atggcggtaggtagagaacaatcagctccagtaatgtacacacagcaggttccttttccc
gaaaaatctggtcatgtggaggatgatccccgcaagtctgcagctgctgcagtggcagca
aagctgaccgcatcaacatcctcagcccagatgctctcttatgtgctctcctccctggca
tcagagggtgttatcagcaatccaattaaagagccttctggtgattatccacctgaaaag
aggcctaagctcgagaatgaccaatcgtcatcttacgtaccccagagctctaacccatct
ccatctcctcccatcccgcattctaatgtccctaccaccaaccaacaatatactcctagt
gaggcaccacctcctccatcatcttctcctccaccattgccaccattaccaccagtacca
caatacccggtgtcccaatatatgcagggcgctgtaccatacagctatagcatggcccaa
caacagccaccaccctcaatgcctgattacccagcaggagctccagtaaatggcatttct
cccttcatggcaccagcaaattcttatccgagttttcaggcttcagatggaaaattctac
aaccagcaatcatccatgcaaatgacgccaatttctaggcaataa
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