Prunus mume (Japanese apricot): 103330307
Help
Entry
103330307 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103330307 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103330307
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103330307
Surveillance factors
Other surveillance factors
103330307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
103330307
NCBI-ProteinID:
XP_008231081
LinkDB
All DBs
Position
LG4:23272420..23280452
Genome browser
AA seq
1601 aa
AA seq
DB search
MPMAHGKVSLPQDLLPANMADAHFSTNDEALEGNGEEKALTGSLDESIGDQVASESSIPL
SPQWLYAKPVDSKTLVTGTSGEMHAPGSLPHGNSTDPNSRDTWRLDASQDKKDWRRNAPD
LDITRRWREEERETGLLGRRDRKKEDRRVGVTSTRDTSTTDGRAEDRHVGATSTKDVTEN
KVLSSDRWHESRRDNKWSSRWGPEDKDKDSQIEKKTDVEKEDIHVDKQSLSNSNRAASER
DSDSRDKWRPRHRMEVQSGGAAPYRAAPGFGMARGQVEKVGFTAGRGRSNTNGTLQIGRP
VLGKASPFLNMYCYPRGKLLDIYRKQKIDLTFDSMPDGMEHVSPITQVGSTEPLAFVAPD
ADEEACLRDILMGSITSSGVLYNSPKDKNVLNDDSKGTSNVTLSKEEGNFAANSEQNVQS
TGEVILNNSFQVTGPEVSPICGSQAHILKESVATEGEQKVLTVKELADGGIDGPSNDVTE
LRNSGYQEQTSSSDRHYVKSNEAHVSDRIVSPEDLSLCYLDPQGNTQGPFLGIDIIAWFE
QGFFGIDLPVRLFDAPDGSPYQELGDVMPHLKTKSGYVSNSSLHAKLEPLDVIKGSLEER
ISAPNYGGPNILNSQQWTPSVLEATSSGSVQSRMPNHSYQSELQYLDNQSIQNFVAEDEE
IVFPGRPKSSSDCLLRSSADIHGSISNSPTLPSLSNEVSETNLPSQQNDKLHPFGLLMSE
LRGSSHLRSAQSSHASLGMDDQVQLRDSFFEGGATIVSQNPLGPMIDQPSFVDTQSDNYI
RNNTNVSLGSIDAHHLSRMGKEISGFGLAEHIMPQKLLKERLQQLNHPSLLPAAHGAGTG
VDQFPGFGFSDSNNPNIQPFHHPVADIEHLLELQRQQQRQLELRQQHHQLELQQHQHQLE
LQQRQRQLELQQHQRQLEFQQHQRQLELQQRLRQLELQQQHHLKQQLHHHQMKLQQQQQS
QTQHLLLEQFLHQQMSDSGYGQWKIDATNGNPLDQLSLRKQFPNDLHPSHSSIQDPLLEQ
IIQANIGRPGQTDFLDLISQAKQGNMHPSELQLRFQQQELQAQQLSVALREQLQMEGERR
LGGPWFADEASHVARDPAGHHQAQMLAFSSSENYQQQQRFPTHEQQLSHLNWNHASRERH
GMNFDIQNACGQGLDLQDQYRRKCSIDKQDSISSGMPSNSQLVSDEFFSSHSVGLERLPC
GNSGQLENSCIEAHRPHLHLDAEQKRRDSEATMAFAESNIWANGDKEHSKQILMDLHQKL
GHQSTELSEVDYQHQLSSSRSRGESVHLPFSLLRDQPVGINTEGPQNSNYSVLFQDHLGG
VGMNEQSSNLATTERVPFRSNSRAFMEDQLFLSGPREVSHTSHVDTSFMCKSAVSDGVSE
LEGNNWKKQGVKGMLNRSVSGYEVNVTDQEETAIDCGELRSNAHSRHSSLSSAGGGCGNF
YSSETGLDKQIGEEVSNGRLPSAITKGSDNALHRRRVLSSQDVLSEAALSLPVKQRNPAA
TLFSDTQTSSKNDAQFRRTSSCSDASVSETSFIDMLKKPVIVEADAANRAASALESSDGG
SQVGRSGKKKGKKGRQIDPALLGFKVSSNRILMGEIHRLDD
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggcccacggaaaagtcagtcttcctcaagatctcctccccgcgaacatggcc
gatgcacacttctccaccaacgatgaagccttggaaggaaatggtgaggagaaggcgcta
acagggtcccttgatgagtcaattggtgatcaagtagcatcggagagcagcatacctttg
tctccacaatggctatacgctaaaccagttgattccaagacactagttactggaacatca
ggagaaatgcatgcacctggctctttgcctcatggaaactctactgatcccaattcgaga
gacacttggcgtttagatgcatctcaggacaaaaaagattggaggaggaatgcacctgat
ttagatattacccgccgctggcgtgaggaggagagggaaacgggcttacttggtaggagg
gatcgcaagaaagaggatcgccgtgtaggtgtcacttcaactagggatactagtactact
gatggtagagcagaagatcgccatgtaggtgccacttcaactaaggatgttactgagaat
aaagtgctgtcttctgaccgctggcatgaatcccgaagagataacaaatggtcatcaagg
tggggccctgaagataaagacaaggactctcaaatagagaaaaaaacagatgttgagaag
gaagatattcatgttgacaagcagtctctttccaatagcaatcgcgcagcttctgaacgt
gatagtgattctagggataagtggaggccacgccatcgcatggaggttcaatcaggtggg
gcagccccatatcgtgctgcaccgggatttgggatggccagaggacaggtggaaaaagta
ggatttactgctggacgagggaggtcaaacactaacggaactctgcagattggcagacct
gtattaggaaaagctagtccctttctcaatatgtattgctacccgagggggaaactcctt
gacatttatcgtaagcaaaagattgatttaacttttgattccatgcctgatgggatggag
catgtatcaccaataacccaagtaggctctactgagccattggcttttgttgcacctgat
gcagatgaagaggcttgtttgagagatatattaatgggaagcattactagcagtggagtg
ttatacaactcccctaaagacaagaatgtattaaatgatgattctaaaggaactagtaat
gtcactttaagtaaagaggaaggaaactttgcagctaacagtgaacaaaatgtccaatct
actggagaggtcattttaaacaattcttttcaagttactggtcctgaggtgtcacctatt
tgtggctcacaggcgcatattttaaaggaaagtgttgctactgaaggtgagcagaaagtt
ctgacagtcaaagaactggctgatggagggattgatggccccagcaatgatgttactgaa
ctgagaaattctggataccaggagcaaacctcaagcagtgatcgtcactatgtcaagagc
aacgaggcacatgtgtcggacagaattgtctcacccgaggatttaagtttgtgctatctt
gatcctcaagggaacacccagggacctttcttggggattgacataatcgcatggtttgag
caagggttttttggaattgacttaccagtccgcttgtttgatgcccccgatggatctcct
tatcaagaacttggtgacgtgatgccacatctgaaaactaaatctggatatgtctctaac
tctagtttgcatgctaagctagagccgttggatgtcattaaaggcagcttggaagagaga
atatctgcacctaactacggggggcctaatattctaaatagtcagcagtggactccatct
gtattggaggctacctcaagtggtagtgttcaatcaagaatgcctaatcatagttatcag
tctgaactccagtaccttgacaatcaaagcattcaaaattttgttgcagaagatgaagaa
attgtatttcctggaaggcctaaaagtagcagtgattgccttttgaggtcttcagcggat
attcatggctcaatttcaaattctcctacccttccttccctttcaaatgaagtttcagaa
actaacctgcctagtcagcagaatgataagttgcatccatttggcctgttgatgtcggag
cttagaggtagttcccatttaaggtctgctcaatcatcccatgcatctttaggcatggat
gatcaggttcagttaagagattctttctttgagggaggtgccactattgttagtcagaat
ccccttggtcccatgattgatcaaccttcctttgtggatacacagtctgataattatata
agaaataacactaatgttagtctgggttctatagatgctcaccatctttctcgcatgggg
aaagagatcagtggctttggccttgctgagcatataatgccacagaagttactaaaagaa
cggcttcagcagctgaaccacccatctctgcttcctgctgcgcatggtgcagggactggt
gtagaccaattccctggatttggtttttctgacagcaataaccctaatatccagccgttc
catcatcctgttgcagatatagaacatctcttagaactacagcgtcaacagcagcgtcag
ttggagcttcgtcaacagcatcaccaattggagcttcagcaacatcagcatcagttggag
cttcagcaacgtcagcgtcagttggagctccagcaacaccagcgtcagttggagtttcag
caacaccagcgtcagctggaacttcagcaacgcctgcgtcagttggagcttcagcaacag
catcacttgaagcagcagcttcaccatcaccagatgaaactgcagcaacaacagcaatct
caaactcagcacttgctccttgaacaatttttacatcaacagatgtctgattctggttat
gggcaatggaagattgatgccacaaatggcaaccctttagatcaattaagtttaaggaag
caatttccaaatgacttgcacccttcccattcctccatacaagatccattgctagagcag
atcatccaagcaaatataggacgccctggacagactgattttcttgacctcatatctcag
gccaagcaagggaatatgcacccttcagagctgcaacttcgttttcagcagcaagagttg
caggcacagcagttatctgtagcattgagggagcagctgcagatggaaggggaaagacgt
ttaggtggtccttggtttgcagatgaagcaagtcatgttgccagggatcctgctggccat
caccaggctcagatgcttgcatttagttcttcagaaaattaccagcaacagcagaggttt
cccacccatgaacagcaactaagccatctcaactggaatcatgcctcaagggagcgacat
gggatgaactttgatattcagaatgcatgtggtcagggtctagatttgcaggatcagtat
cggcgtaagtgctctattgataaacaggactccatttcttctgggatgccctctaacagt
caactggtttctgatgagtttttttcttctcattcagttggtttggaacgcttgccctgt
gggaacagtgggcagctggaaaatagctgcattgaagcacatcgaccgcatttgcatctt
gatgctgaacaaaaacgacgagattcagaagctaccatggcttttgctgagtcaaatata
tgggctaacggtgataaggaacactcaaaacaaattttgatggaccttcaccaaaaactg
ggtcatcaatctacagagttgtcagaagttgattatcagcatcaattatcatcttccaga
agtcggggagagtctgtacatcttccattcagtcttctccgggatcaaccagttggtata
aacacagaaggaccacagaattccaactatagtgtcttgttccaggaccatttgggtggt
gtaggtatgaatgaacagtcaagcaatctggcaactactgaaagagttccgtttagatct
aattccagagcatttatggaggatcagctgttcttgtctggacccagggaagtttctcat
acttctcatgtggatactagcttcatgtgtaaatcagctgtgagtgatggtgtatcagag
ttggagggtaataattggaagaaacaaggggtgaaaggcatgttgaacaggtcagtttca
gggtatgaagtaaacgtgacagaccaagaagaaactgcaattgattgcggggaacttcgt
agtaatgcccatagcaggcatagctcactaagcagtgctggtggtggatgcgggaacttc
tacagctcagagacaggattagataaacagattggagaagaggtttctaatgggaggctg
ccttctgctataaccaaagggtctgacaatgctttgcatagacgccgggttttatcttcc
caggatgtcttgtctgaggcagcattatctctgcctgtcaagcaaagaaatccggccgca
acccttttctctgatactcagacatctagcaagaatgatgcgcaatttaggaggacttca
tcttgcagtgatgcttctgtgtccgagacatcattcatagacatgctcaagaaaccagtc
attgtagaggctgatgcagccaacagagcagcatccgcattggagtcgtctgatggaggt
agccaagtggggcgaagtggcaagaagaaagggaagaaaggaaggcagattgatcctgct
ctccttggttttaaggtttccagcaaccggatactgatgggcgagatccatcgacttgat
gattga
DBGET
integrated database retrieval system
