Prunus mume (Japanese apricot): 103330327
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Entry
103330327 CDS
T03196
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103330327
03036 Chromosome and associated proteins [BR:
pmum03036
]
103330327
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103330327
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103330327
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
103330327
microRNA pathway
RISC loading complex
103330327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Collagen
Motif
Other DBs
NCBI-GeneID:
103330327
NCBI-ProteinID:
XP_008231109
LinkDB
All DBs
Position
LG1:complement(12166709..12175481)
Genome browser
AA seq
939 aa
AA seq
DB search
MDLFEPDGNGANGVNGANGVNGADGVNAADGVNGADHSLPPPPPVIPPDVVPLRPEADNI
PEPVKKKNVRVPIARRGLGTKGTKIPLVTNHFKVNVTNIDGYFFHYSVSVSYEDGRPLDG
KGAGRRIIDRVHETYHSELGGKDFAYDGEKSLFTVGSLPRNKLEFAVVLEDMPSNRNNGN
ASPDGHGSPNENDRKRLRRPNRSKTFNVEISYAAKIPMKAIGDALRGQESENSQEALRVL
DIILRQHASKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVST
TMIIQPGPVVDFLIANQNVRDPFSLDWMKAKRTLKNLRVKTSPSNLEYKITGLSEKPCRE
QAFTLRNKHAKDGEDGEIEVTVYDYFVNHRNIQLRYSADLPCINVGKPKRPTYIPLELCS
LVSLQRYTKALSTLQRASLVEKSRQKPQERMSVLSNALKINNYDAEPMLRSCGVSISSGF
TQVEGRVLPAPRLKVGNGDDFFPRNGRWNFNNKKLVKPTKIEKWAVVNFSARCDLKGLVR
DLIKCGEMKGISIEPPFDVFEENPQSRRAPPMVRVERMFEDIQSKLPGQPQFLLCLLPER
KNSALYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSLLAVEYSPSI
PVVSKAPTIILGMDVSHGSPGQSDVPSIAAVVSSRQWPLISRYRASVRTQSPKVEMIDSL
YKRISELEDDGIMRELLLDFYTSSGKQKPDQIIIFRDGVSESQFNQVLNIELDQIIEACK
FLDESWNPKFVVIIAQKNHHTKFFQPPSPDNVPPGTIIDNKVCHPRNNDFYLCAQAGMIG
TTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAATQMGQFMK
FEDASETSSSHGGVTSAGAVPVPQLPRLKENVSSSMFFC
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtttgagccggatggaaatggagcaaatggggtgaatggggcaaatggggtg
aatggggcagatggggtgaatgcggcagatggggtgaatggggcagatcactcattgcca
cccccaccccctgttattccaccagatgttgttccattgcgtcctgaagcagataacatt
cctgaacctgttaagaagaaaaatgtgcgggttccaattgctaggcgtggccttggaacc
aaggggacaaagatacctctggtcactaatcacttcaaagtgaatgttactaatattgat
ggttacttcttccactacagtgtttctgtttcttatgaagatggccgtcctcttgatggc
aagggtgctggaagaagaataatcgatagggtgcatgagacttatcactctgagttaggt
ggaaaggactttgcttatgatggggagaagagcctcttcactgtaggttcccttccacga
aacaaacttgaatttgccgttgtgctcgaggatatgccatcgaacagaaataatggaaac
gctagccctgatggtcatgggagtccaaatgagaatgaccggaagagattaaggcgccca
aatcggtctaaaacattcaatgtggagattagctatgctgcaaaaattcccatgaaagca
attggagatgctctgcgtggtcaagaatctgagaattcccaagaagctctgagagtactg
gacatcatattaagacagcatgcatctaagcaagggtgcctcctggttcgccaatctttc
ttccataatgatccaaaaaatttcgccgatgttggaggtggtgttcttggctgcagagga
ttccattcaagttttagaaccacccagggtggcttatctttgaatattgatgtatctact
acgatgattatacagcctgggccagtggtggattttttaattgccaaccaaaatgttaga
gatcctttttcacttgactggatgaaggctaaacggacactcaagaatttgagggtcaaa
actagtccatccaatctagaatataagataactggtttgagcgagaagccatgccgggag
caagcttttacattgagaaacaaacatgccaaggatggagaggatggagaaattgaagtg
actgtttatgattattttgttaatcatcgcaatatacagttgcgttattctgctgatcta
ccatgtattaatgttgggaagccaaagcgtcctacttatatccccctggagctttgttct
ttggtgtccttgcaacgctatacaaaagctctttccacacttcaaagagcttcactggtt
gagaaatcaaggcaaaagccgcaagagagaatgagtgttttgtctaatgctttgaaaatc
aacaattatgatgctgaaccaatgctacgctcatgtggtgtttcaattagtagtggcttt
actcaagtggaaggccgtgttctaccagctccgagattgaaagtgggcaatggggatgat
ttcttcccacgaaatgggcggtggaatttcaacaacaagaaacttgtgaagccaactaag
atagaaaagtgggctgttgtcaacttctccgcacgctgtgatttaaaaggcctagtccgt
gatctgatcaaatgtggagagatgaagggaattagcatagagcctccttttgatgtattt
gaagagaatccgcagtccagacgtgccccacctatggttagagttgagagaatgtttgag
gatatacagtccaaacttcctggacaaccacagttccttctttgtttgcttccggagaga
aaaaatagcgctctatatggtccatggaagaggaagaatcttgctgagtatggaattgtt
acacaatgcattgctcctacaagggtcaatgatcaataccttacaaatgttctgttaaag
atcaatgctaagcttggtgggttaaattcactgttggcggttgaatattctccttctatc
cctgtggtttccaaggcacccacaatcattcttgggatggatgtgtcacatggctctcct
gggcagtctgatgtgccatcaattgctgcggtggtcagctccaggcaatggccactgatt
tctcgctacagggcatctgttcgtacacagtcccccaaggtggagatgatagactccctg
tacaagcgaatttctgaattagaagatgacggcattatgagagagctgcttctggacttc
tatacaagttcaggcaagcagaaaccagaccagatcatcatattcagggatggagtcagc
gagtcccaattcaaccaagttttgaacattgaactggatcaaatcattgaggcatgcaag
tttctcgatgagagctggaacccaaaatttgtggtgattattgctcagaagaaccaccat
accaaattctttcagcctccttcccctgacaatgttcctcctggaaccattatagacaac
aaagtttgtcatccaagaaacaatgacttttatctctgtgcccaagctggaatgattggg
accacaaggcctacacattatcatgttcttttagacgaagtaggtttctcagcagatgat
ctgcaggagctagtgcattctctttcatatgtataccaaagaagtaccactgccatttct
gtagttgctcccgtttgctatgctcacttggccgccactcagatgggacagttcatgaaa
tttgaagatgcatctgagacatcctcgagccatggcggtgtgacctctgctggagcagtt
cctgtccctcaactgcccaggcttaaggagaatgtgtccagttccatgtttttctgctga
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