Prunus mume (Japanese apricot): 103330405
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Entry
103330405 CDS
T03196
Name
(RefSeq) sister chromatid cohesion 1 protein 2
KO
K06670
cohesin complex subunit SCC1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103330405
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103330405
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
DUF4886
Motif
Other DBs
NCBI-GeneID:
103330405
NCBI-ProteinID:
XP_008231202
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Position
LG4:23535644..23540919
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AA seq
774 aa
AA seq
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MFYSQCLLSRKGPLGAIWVAAYSFKKLKKAQVTQTDISSSVDKILHDEWDVVAYRVLAYL
LLGVVRIYSKKVEYLFNDCNEVLIKINKFVVSTKKNADADKLRAPYYSVTLPDRFELDAF
DLGILEVEDVNGCNVVSHEDITLKDCAKGNGIGQFYSEMYGYEEFGVCDNISSADFTPIK
DVLSSYMLDFDMEFRTSSNGANSEAFMEKLQENSFSQEECADLETFCGVQEEPPNQVVSY
GEDQETNREQIKAPDIAPSEDGIQGESSMEKPRDLMLSQEGLNLETVYGIEREPSYYVRS
SSEDHQIDREEIMEPELVQPENQTCQVIRQDNNLIASEANMEKLLRCTVSQEEYMDLDMF
LGAKQSRELVCSSGEENHIDREPIKLPEMSSPKSIEHQIIVQEDPDPLSVEYDGTPGAKF
PSALGVTTPKLMVIRTPATKESARISRKRKCVIDDMTVLPNEVIRRSIHDAGDLVSKRRK
VPQTALAVWKACQIGILTHDFSEPLLPAGVSQELKSLSCKRKLKIIEPAETVGTPEKLDV
LESPSVGRSEQIEIAPETPVRRSQSMKSFESPNSPEAHDVDIVRPEPSGRIEEEPCLSRE
QADPPESLEEVPFLDRDILGPGPSGRIEKEPSLGREQADPSGTVEEVPCLGRDQEHDFNL
LNEEIALCEGVNPEVDGWSGRTRVVARYLQRHFPNRKKQGEEEVNLLQVSEGRTKRESAR
LFYEILVLKTKGYVDVKQDDAYGDILIWKRPIWDQTWGDDMVNRGASKTMYLCA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttctactcacagtgcctcctatcaaggaaggggcctttgggcgccatttgggttgcc
gcttactctttcaaaaagctcaagaaggcgcaggtcactcagactgacatctcctcctct
gttgataaaattttgcacgatgaatgggatgttgttgcatacagggttctcgcctacctt
cttcttggtgtcgttcgaatatactcgaaaaaggttgaatatctgttcaatgattgcaat
gaagtgctgattaaaatcaacaaatttgtggttagtacaaaaaagaatgcagatgcagac
aagctgcgggcgccttattactctgttactctaccggatagatttgaacttgatgctttt
gatctggggatccttgaagttgaagatgtcaatggatgcaatgtggtgtcccatgaagat
atcacacttaaagattgtgcaaaggggaatggaattggacagttttattcagaaatgtat
ggttatgaggaatttggtgtctgtgacaatatttcgtctgctgatttcaccccaatcaaa
gatgtactttcatcttacatgttggactttgacatggagttcagaacatcaagtaatgga
gccaactcagaagcatttatggagaagcttcaagagaatagcttctctcaagaagaatgc
gcagatctagaaacattttgtggagttcaggaagaacctccaaaccaagttgtttcatat
ggagaagatcaagaaactaatagagagcagataaaggctccagatatagcaccgtctgaa
gatggaattcaaggagaatcaagcatggaaaagcctcgagaccttatgttgtctcaggaa
ggtttgaaccttgagacagtctatgggattgagagagaaccttcctactatgttagatca
tccagtgaagatcatcaaattgatcgtgaggagattatggaaccagagttggtgcaacca
gaaaatcagacgtgtcaggttataagacaagacaataatctaattgcctcagaagctaat
atggaaaaactgctaagatgtacagtttctcaagaagagtacatggaccttgatatgttt
cttggggcgaagcaatctcgagaacttgtttgttcatctggtgaagagaatcatattgac
agagagccaataaaattgccagagatgagttcgccaaaaagtatagaacaccaaattatt
gtgcaagaagatccagatcctctctctgttgaatatgatggaactcctggtgccaagttc
cccagtgccttaggtgttactacaccaaagttgatggttattcgtacaccagctactaag
gaatctgctcgaatttctaggaaaagaaaatgtgtcattgatgatatgacagtgctgcct
aatgaggtaatccggcgaagcatacatgatgcaggtgacctggtttctaaaagaagaaaa
gttcctcaaactgcccttgctgtttggaaagcctgtcaaattggaattctaacccatgat
ttctcggagccattgctacctgctggtgtttcacaagaacttaaatccctgtcctgcaaa
aggaaattaaagattatagaacctgctgaaactgttggaactccagaaaagttagatgtg
ttggaatctccaagtgttggtaggtcagagcaaatagaaattgcaccagaaacacctgtt
cgtcgctcacaatcaatgaaatcatttgagagtccaaacagccctgaagctcatgatgtg
gatatagtaagacctgagccatctggaaggatagaggaagagccatgcctgagcagggag
caagctgacccacctgaaagtttagaagaagtaccatttctggacagggatatattagga
cctgggccatctggaaggatagagaaagagccatccctgggcagggagcaagctgaccca
tctggaactgtagaagaagtaccatgtctgggcagggatcaagaacatgatttcaatctg
ctgaatgaggagattgctttatgcgaaggagttaaccctgaagttgatggatggtcagga
agaaccagagtagttgcaaggtacttgcagagacactttccgaatcgtaaaaaacaagga
gaggaggaagtgaacttgttgcaggtttcagaaggaagaactaagagagaaagtgcaagg
ctattttatgagatactggtgttgaaaactaaagggtacgtggatgtgaagcaagatgat
gcgtatggtgatattctgatctggaaacgccccatctgggaccaaacgtggggagacgat
atggttaacagaggcgcctctaaaactatgtatttatgcgcatag
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