Prunus mume (Japanese apricot): 103330460
Help
Entry
103330460 CDS
T03196
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103330460
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103330460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
UvdE
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103330460
NCBI-ProteinID:
XP_008231271
LinkDB
All DBs
Position
LG5:84551..87519
Genome browser
AA seq
452 aa
AA seq
DB search
MNSQSHFLSILLIAFLASFSFSFSSNVPEDPLVLDHHHHQINSSGDHDEYIKPSPTISRT
SRLAILSWAIAAHHSASANNIVVNVDSFGAKGDGGDDTQAFRKAWKKACSSQRGVDLVVP
NRNYHLKPINFSGPCNSPITLKIYGTIKASPNRSDYSDDTRHWIVFENVTNFRVEGGGTI
DGNGRIWWQNSCKVNEALPCTIAPNAMTFFGCINLQVDNIRFRNPQKMHLSFHECVNVKA
SNLIVTAPEDSPNTDGIHVTGTQNIKIMNCLIRTGDDCISIVSGSRNVRATDIICGPGHG
ISIGSLGAGNSEAEVSDVMVSRAKMMGTTNGLRIKTWQGGSGYASNIVFKNIMMHNVSNP
IIINQYYCDQDEPCQEQTSAVKISNVVYDNVKGTSASKVAVKFDCSKRFGCQGILLRNVY
IKPLGEGTAEASCENVSLIHRGRVSPKCSSTI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacaaagccattttctctccatacttctgatagctttcttagcctctttttcc
ttctcttttagcagtaacgtcccagaggacccacttgtacttgatcatcatcaccatcaa
attaattctagtggtgatcatgatgaatatataaaaccctcccctacaatatcaaggaca
agcaggctagctattctcagctgggcaattgctgctcatcattcagcttcagcaaataat
attgttgttaatgtggatagttttggagctaaaggagatggcggggatgatacccaggcg
tttagaaaagcttggaagaaggcttgttcttctcaaaggggagttgatctcgtggttcct
aacaggaactatcacctgaaaccaatcaatttctctggtccttgcaattctcctatcacc
ctcaagatctatggaacaatcaaagcctctcccaaccgatcagattacagtgatgataca
cggcattggattgtgtttgaaaatgtgacaaactttagagtcgaaggtggtggcaccatc
gatggaaatggaaggatatggtggcaaaactcttgcaaggttaacgaagcccttccttgc
acgatcgcaccaaatgccatgactttcttcgggtgcatcaacttgcaagttgacaatata
aggtttcgaaatccccagaaaatgcatctttcgtttcacgaatgtgtgaatgtgaaagct
tcgaatctcatagtaactgcaccagaggatagccccaacacagatggaatccatgtcaca
ggaacacaaaatattaagataatgaactgtcttattaggacaggggatgattgtatttca
atagtaagtgggtcacgaaatgttcgagctacggatataatctgcggaccaggccatgga
atcagcattggaagcttaggtgctgggaattcagaagcagaggtttcagatgtgatggtt
tctagagcgaaaatgatgggcaccaccaatggattgagaataaagacttggcagggcggt
tctggatatgccagcaacatcgtattcaaaaatattatgatgcacaacgtgagcaatcca
ataatcataaaccaatattactgtgatcaggacgagccatgccaagaacagacttcagct
gtgaaaataagcaatgtggtgtatgacaatgtaaaaggcacgagtgcttcaaaagtggca
gtgaaattcgactgcagcaagcgcttcggatgccaaggaatcttgttacggaacgtttac
ataaaacctcttggcgaaggaacggccgaagcttcctgtgagaatgttagtctaatccat
agggggagggtttctccaaagtgttcttcaacaatttaa
DBGET
integrated database retrieval system