Prunus mume (Japanese apricot): 103330555
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Entry
103330555 CDS
T03196
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103330555
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103330555
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PITH
Motif
Other DBs
NCBI-GeneID:
103330555
NCBI-ProteinID:
XP_008231375
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Position
LG1:complement(12226995..12229363)
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AA seq
468 aa
AA seq
DB search
MKVPLTATVLILTIWLIASPNSSCSARRVVPDDFDLFDYGAVHHNTPTDDEGFSQEAFRE
GWETESTTRDSFNRANAQTEEYDPQAFLEAWEAKTNTFNVVDYGAVGNGLVDDTKAFLKA
WGAMCASSTQGTLTLVVPKGKRFLLNAVAFEGPCKASNVNFQIQGSIVAPNNIGAWTNKE
MWIHFSDVQGLSVNGGGRIDGNGAVWWKACGSSKDCQRPTALHFNKCHGFQLSRLAIFNS
PKNHISICGCNGPRVFGLLIWAPKDSPNTDGIDISRSTRVTIQSSHIATGDDCIAINSGS
SYIKIRDIKCGPGHGISIGSLGQHGEYSQVEEVQVSNCTFKGTTNGVRIKTWEGGSGYAR
KITFEGITFEDTKNPIIIDQHYFDKRPTSATDINKSVQVSDVTYRNINGTCTDEKAITLA
CAGGGCTNIVMNNVNIKSDLPNKRSYAYCDNAHGTSSFSLPSVPCLSH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcccgcttaccgccaccgttttgatcctaactatttggctaattgcttcacct
aatagttcatgtagtgctagaagagtcgtgccagatgatttcgatttgtttgattatggt
gctgttcatcacaacaccccaactgatgatgagggtttttctcaagaggccttccgagaa
ggatgggagactgaatcaacaacaagagactcattcaatcgtgcgaatgcccaaactgaa
gaatatgatccacaagccttcctggaagcatgggaagcaaaaacaaatactttcaatgtg
gtagattacggtgctgttgggaatggcctagtagatgatacaaaggccttcctcaaggca
tggggagctatgtgtgcatcatcaactcaaggcacactcaccctggtggtaccaaagggc
aaaagattcttgttaaatgctgtggcgtttgaagggccttgcaaggctagtaacgtaaat
tttcagatacaagggagtattgttgcaccgaataacattggtgcatggacaaacaaggag
atgtggattcatttttcggatgtacaaggtctatcggtcaacggaggaggtcgaattgac
ggaaacggcgccgtttggtggaaagcttgcggtagcagtaaggactgtcaaagaccaact
gctctccatttcaacaaatgtcatggcttccaattgagtcgtctggcaatttttaatagc
cctaaaaatcatataagcatttgtggctgcaatggcccccgagttttcggtctcttaatt
tgggcacctaaagacagtccaaacacagatggaattgatatttcccgatcaacccgagtc
acaattcaatcttctcatatagcaactggtgatgattgtattgccatcaatagcggttca
tcttatatcaagattagggatattaaatgcggaccaggccatggtattagtattggaagt
ctaggtcaacatggcgaatacagtcaagtggaagaggtgcaagtgagcaattgcaccttc
aaggggacaacaaatggagtgagaatcaagacatgggaaggcggatcgggatatgctagg
aagatcactttcgaggggatcacatttgaagacaccaaaaatcctatcataatagaccag
cactatttcgataaacgacctacttcagcaacggacataaacaagtcggtacaagttagc
gatgtgacataccgaaacataaacggaacttgcacagatgagaaagccataactttggcc
tgcgcagggggcggatgtacaaacattgtgatgaacaacgtgaacataaaatcggatctt
ccaaacaagaggtcttatgcttactgcgacaatgcccatggcacctcttccttctctttg
ccttctgtcccatgcctttcgcattga
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