Prunus mume (Japanese apricot): 103330566
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Entry
103330566 CDS
T03196
Name
(RefSeq) sister chromatid cohesion 1 protein 3
KO
K06670
cohesin complex subunit SCC1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103330566
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103330566
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
103330566
NCBI-ProteinID:
XP_016649979
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All DBs
Position
LG5:complement(974785..980917)
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AA seq
728 aa
AA seq
DB search
MFYSQTFLARKGPLGTVWCAAHLQSRLKKSHYTSTDIPSTVDRIMFPDVPIALRMSGHLL
VGVVRIYSKKVDYLYQDCNVVLTSLRKAFASIDLNLPENARQAPVQSITLPDTFDLDALD
LDTDLFCEGAHDNHLRSEEDITLTDQIPIGTNPYVAITFDEDIQMYLSHPKEVFGSDATP
MDEDIVHTPPAEGVPSPGNQTDEQIRFSDDFTLPNFPEVEVPQHVGFEDPVPTNQRESID
LRHRDDGSPEHVQEMEVLRDAVPDFSSEILPPVSPSNRDDVTEPHRSVDPESSEKDILSP
IMEETIPSGGPSPLFQPSSGPPASVASLPEGLQNIDTHVSFELQPTPPPEQPRARPRKRK
QYFDETLVLSNEFMNKTIQDTSDLLRKRRNIPCSALGVWKLNNSLRKEQIFFQPSLSGLC
SDLCNISNKDYISTKSHLFEEALPDSRPTRSPSPTTEAFSEARVAQSPRPFTTEISPERR
VARSLPVTEASTEYRGAQSPATQCNPEIDQLRHVEEHDGENILPEFIPSPRFMPSPRRDD
LTPAPSPYLRSASVPPLETSTGTQILQTPDLPASIGFHESVFETPRTIFEEQLGPENTGL
SDTPDLRNTAEAEDLYFLEADSSTPAGSQGTQGVPGSQGTHAVDSLSVRTRAVAQYLKRQ
SPITSTSEDLFGDLSLDKILEGKTRKLCARMFYETLVLKSFDLVDVKQEVPYGDISLKLT
QTLSKAQI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgcagacgttcttggctcggaagggcccactgggaaccgtatggtgtgcg
gcgcatctgcagagcaggttaaagaagtcccattacacttccaccgacatcccctccacc
gttgatcgcatcatgtttccggatgttcctattgcactgagaatgtcaggacaccttcta
gtaggtgttgttcggatatactcgaagaaagtcgactatctttaccaggactgtaatgtt
gttttgactagcctaagaaaggcctttgcttctatagacttgaatttgccagagaatgca
agacaagcaccggttcaatccatcactttgcctgacacatttgaccttgatgctttggat
ttggatacagacttgttctgtgagggggctcacgataatcatctcaggagtgaggaagac
atcacactaacagatcaaattcctattggaacaaacccttatgttgctataacttttgat
gaggatattcagatgtatctatcacatccaaaagaggtttttggttcagatgctaccccc
atggatgaggacatcgtccatacacctccagctgagggggttcctagtccaggcaatcag
acagatgaacaaataagatttagtgatgacttcacccttccaaactttccagaagttgag
gttccacaacatgttggttttgaagaccctgttccaactaaccagagagaaagtattgat
ttgaggcatagagatgatggttcccctgaacatgttcaagaaatggaagttctgcgagat
gctgttcctgattttagctcagaaatccttcctccggtttcccccagtaacagggatgac
gtaactgaaccacacagatctgttgaccctgaaagtagtgagaaagacattctttctcca
attatggaggaaactataccttctggtgggccatctccattatttcagccaagttcagga
ccaccagcatctgttgcttctttgccagagggtctacaaaatattgatacacatgtttca
tttgaacttcaaccaacaccacctcctgagcagccaagagcaagaccaaggaagagaaag
cagtattttgatgagacccttgtgttgtccaatgagtttatgaataagacaattcaagat
actagtgatttattgcgtaaaaggaggaatattccatgctctgctttgggtgtttggaag
ttgaacaacagtttaagaaaggaacaaatattcttccagccttcattaagtggtctgtgt
tcagatctttgtaacatttccaacaaagactatatatccacaaaatcccatttgtttgag
gaagctcttccagactctaggcctacaagatctccttctcccacaactgaagctttctca
gaagctagggttgcacaatctcctcgtccttttacaactgaaatctccccagagcgtagg
gttgcacggtctcttcctgtaactgaagcttccacagagtataggggtgcacaatctcct
gctactcaatgcaacccagaaattgatcaactcagacatgttgaagaacatgatggggaa
aatatcttacctgagtttataccttcaccaagattcatgccttctcccaggagagatgac
cttacgcctgctccatctccatacttacggtcagcttcagttcctccattggaaacaagc
actggaacacaaatactgcagacaccagacctacccgcttcaattggatttcatgagtct
gtttttgaaactccaaggacaatatttgaggagcagttaggtccagaaaacactggtcta
tcagatactcctgacttaaggaatactgcagaagctgaagatctttattttctggaagca
gatagcagtacaccagctggatctcaagggacacaaggagtaccaggatctcaagggaca
cacgcagttgattcattgtctgttagaaccagggctgtggctcagtatttaaaaaggcaa
tctcctatcacctcaacctcagaagacctatttggagatctcagcttagacaaaatctta
gaaggaaaaacaagaaagctatgtgcccgaatgttctatgaaactctggttttgaaaagt
ttcgatcttgttgatgtaaagcaagaagtaccttatggtgacattagtttgaaattgact
caaaccctatcgaaggctcaaatttaa
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