Prunus mume (Japanese apricot): 103330611
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Entry
103330611 CDS
T03196
Name
(RefSeq) tetratricopeptide repeat protein 27 homolog
KO
K24935
tetratricopeptide repeat protein 27
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmum04990
]
103330611
Domain-containing proteins not elsewhere classified [BR:
pmum04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
103330611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_14
TPR_1
TPR_CcmH_CycH
TPR_17
TPR_8
TPR_11
TPR_19
TPR_12
TPR_15
PPTA
DUF7017
Motif
Other DBs
NCBI-GeneID:
103330611
NCBI-ProteinID:
XP_008231429
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All DBs
Position
LG5:1624461..1638137
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AA seq
907 aa
AA seq
DB search
MSETLPELSILRGYELRLLRCTLQSPASDHSPHPQPSDHAHPTHHLHPLINDLLTFIESG
HYLRALTSPDVNRAVFKLAESDSLGDSAECADRVYSELLDRVESFISKECEEEENDSGKD
KAYRVIVVLCIAVAALFGFAQCNLTGPLEGLPKCPLPLEVPQCDEWENWAGNQLMAAGSD
LLGKLSNIQYIVYAKMLAMKMKDLLFDGSLPSTYGIRSISWWLIRIILLHQRILDDRSSS
LFNLLQVFTSETLNHFGTLEKVTTYWGNNLRNDEGSSLVSMIYLEAGIMEYTYARVDSCR
LHFESAEAAAGLQLSVTGVLGFRTVHQVEPKAQMVLLANPTSSNSSGSCLAESPGSQTNN
SSIGNLHPSETYEVSDILMTPKLLGNDSNSGIISEGIQVGGTAAVPLSAVHQALILAKCL
LIEKGTRHDEMQRWEMAPYIEAINSQQSSYFIIRCFCDILRIRWESTRSHTKERALLMME
KLVQGIYDPSPGVAERILFCYGVQIPTIPALRKEYGELLVGCGLIGEAVKTFEDLELWDN
LIFCYRLLQKKAAAVELIKTRLSETPNDSRLWCSLGDVTNDDACFEKALEVSNDRSARAK
RSLARSAYNRGDYEKSKTLWESAMALNSLYPDGWFALGAAALKARDTEKALDAFTRAVQL
DPENGEAWNNIACLHMIKKKSKESFIAFREALKFKRNSWQLWENYSHVAVDVGNVGQGLE
AARMVLDITNNKRIDAELLERIVAEVEIRASHMTPDMTDEDNCSTEVGKFRETEHLVEFL
GKVLQQIVRSGNGADIWGLYARWHRMKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKKFA
QSSLELCKVYMEISASTGSRRELLTAEMHLKNTIKQAVSFSDMEELQDLKACLHQVKSKL
ESDSLCV
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacgttaccggaactttcaatcctccgcgggtacgagctgcgtctcctccgc
tgcaccctgcagtctccggcgtccgatcactcaccccatccccaaccgtccgatcatgcc
catcccacccaccacctccaccctctaatcaacgacctcttaactttcatcgagtcgggc
cactacctccgagccctcacctcccccgacgtaaaccgcgccgttttcaaactcgccgag
tctgactcgctcggagactcggcggagtgcgctgacagagtgtactccgagttgctggac
cgagttgagtcgtttatatccaaggaatgcgaagaagaagagaatgatagtggcaaggac
aaggcctacagagtcatcgtggttctgtgcattgctgtggctgccttgttcggttttgct
caatgtaacttgactggaccgttggaggggttgccaaagtgtcctctgccactggaagtg
cctcaatgtgatgagtgggagaattgggcgggtaatcagcttatggctgctgggtctgac
ttgcttggaaagttatccaatattcagtatatagtttatgcgaagatgctggccatgaag
atgaaagatttgttatttgacggaagtttgccttctacatatggaattaggagcatttca
tggtggctcattaggatcatccttcttcatcaaagaattcttgatgaccggtcttcttct
ctgttcaatcttttgcaagtctttacgagtgaaactttgaatcattttggcactttggag
aaagtaacaacttattggggtaacaatttacgtaatgatgagggttcgtcacttgtctca
atgatttatctggaagctggaataatggaatacacctatgcaagagttgattcatgcagg
ctacattttgaatcagctgaagcagcagctggtcttcagctttctgttacaggtgttctt
ggcttccgtactgtacatcaggtagaaccaaaggcacaaatggtacttttagcaaaccca
acttcttcgaacagcagtggtagctgcctcgcagaaagccctggctcccagacaaacaat
tctagcattggcaatctgcatccatctgaaacctatgaggtctctgacatattgatgacc
ccaaaattgttagggaatgatagcaattctggaattatttcagaaggcattcaagttggt
ggtactgctgctgttcctttgagtgcagtccatcaggcactgatcctggctaaatgcctt
ctaattgagaagggtacacgacatgatgaaatgcaaagatgggaaatggctccttacata
gaggcaattaattctcagcagtcgtcatactttattatacgatgtttctgtgacatccta
cggattcggtgggagtcaacacgtagtcacacaaaggaacgtgcattgctgatgatggaa
aaattggttcagggtatctatgacccttctccaggagtggcggaaaggattcttttctgc
tatggcgttcaaattcctaccattcctgccctgcggaaggagtatggtgaacttttagtt
ggctgtggtcttataggagaggcggttaaaacttttgaggatttagagttatgggataat
cttatattctgctaccgcctattgcagaagaaagcagcagctgttgaactgatcaagaca
cgactttctgaaacacccaatgactccaggttatggtgctcattgggtgatgttactaat
gatgatgcctgctttgaaaaagccctggaagtttcaaatgatagatcagctcgagccaag
cggtctcttgctcgcagtgcatacaatagaggggactatgaaaaatcaaaaaccctatgg
gagtctgcaatggccttgaattctctgtatcccgatggctggtttgcacttggggctgct
gcgttgaaggctagggatactgaaaaggcattggatgcttttactcgggctgttcaactt
gatcctgaaaatggggaggcatggaataatattgcttgtttgcatatgataaaaaagaag
agtaaagaatccttcattgcatttagagaagctctgaaattcaaacgaaacagctggcaa
ctgtgggagaactacagccatgttgccgtagatgttggcaatgttggtcagggtctagaa
gctgcacggatggtgttggatattactaataataaaagaatcgatgctgaattattggaa
agaattgtggctgaagtcgaaataagggcttcacatatgactccagatatgacggatgaa
gataactgttccactgaggtgggaaaatttcgggaaactgagcacttagtagagttcctt
ggaaaagttctacagcagatagttcgaagtggaaatggagcagatatttggggtttgtat
gcaaggtggcacagaatgaaaggagaccttacaatgtgctctgaagctttattaaagcaa
gttagatcataccagggatctgatttgtggaaagatagagatcggtttaagaagtttgct
caatcatccttggaactctgtaaggtgtatatggaaatttctgcgtctactggtagccgt
cgtgaactgcttacagcagagatgcacctaaagaacacaattaaacaggctgtgagtttc
tcagacatggaagaacttcaggatcttaaagcttgccttcatcaagtgaagtcaaaactc
gaatccgattccctatgtgtttag
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