Prunus mume (Japanese apricot): 103330806
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Entry
103330806 CDS
T03196
Name
(RefSeq) retinoblastoma-related protein
KO
K04681
retinoblastoma-like protein 1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103330806
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
103330806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
103330806
NCBI-ProteinID:
XP_008231639
UniProt:
A0ABM0NYC5
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Position
LG5:complement(3665833..3673760)
Genome browser
AA seq
1026 aa
AA seq
DB search
MSPPALVKMEDTNNEVSASNSSNSESRDSDPVGARFTDLCKNGLSLDENPYTQAMKLFKE
TKHLLISNASAIGNGTPEEAERFWFAFVLYSVKTLSEKNSDNSQLSSDDNGFSLFQILRA
VKLNIVDFFKELPQFVVKAGPILSNLYGIDWENKLEAKELQANFVYLSLLSKYYKRAYRE
FFLTSDANADKQSAVASGTGYVSEYHRFGWLLFLALRVHVFSRFKDLLTCANGLVAILAI
LIIHVPVCFRKFSIHDSTHFAKKGDKGVDLLASLCNIYDTSEDELRNTMEMANALIADIL
KKKPCSASECKNENLENMDPDGLTYFEGLMEEPSLSSSLDILEKDYDDAIRSKGELDERV
FINEEDSLLGSRSFSGGSMNLSGVKRKVDSIASPTKTITSPLSPHHSPASHVNGGANSKM
VATPVSTAMTTAKWLRTFISPLPSKPSTELEGFLASCDRDVTNDVIRRAQVILEAIFPSI
SLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQILHATNLTSLLTNE
RFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH
LNSLEERLLESMVWEKGSSMYNSLTVARPALSAEINRLMLLAEPMPSLDEIAMQINFSCG
GLPPVPSLQKHENSPGQNGDIRSPKRLCTDYRSVLLERNSFTSPVKDRLLASSNLKSKLP
PPPLQSAFASPTRPNPGGGGETCAETGISIFFSKIVKLAAVRINGMVERMQLSQQIRENV
YRLFQQILVQRTSLFFNRHIDQIILCCFYGVAKISQLSLTFREIIHNYRKQPQCKSLVFR
SVYVDWPPARRNGRPAQEHVDVITFYNEIFIPSVKSLLVELGSAGPTTTRANVVPEANNN
NDAQCPGSPKVSTFPTLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGEST
HAYQSPSKDLTAINNRLNGTRKLRGILNFDNVDVGLVSDSMVANSLYLQNQNGSLEAPVK
TEQPDL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagtccacctgctttggtgaagatggaagatacgaacaatgaagtttcagcttccaac
agctcaaattccgaaagcagagattcagaccccgtcggagctcgatttactgatttgtgc
aagaatggattgtcattggatgagaatccttacacgcaagctatgaagctgttcaaagaa
acgaaacatctattaatatcaaatgcttcggctattggaaatggaacacctgaagaagca
gaaaggttctggtttgcctttgttttgtactccgtgaaaacattgagtgagaagaattca
gacaattctcagctgagctctgatgataatggtttttctctcttccaaattttgagagct
gtgaagctgaacattgtagattttttcaaggagcttcctcagtttgttgttaaggctggc
ccaattttgagtaatctttatggcatagattgggaaaacaaacttgaggcaaaagagttg
caggcaaattttgtgtacttgagcctgttaagcaagtactacaaacgtgcataccgcgaa
ttcttcttgacaagtgatgcaaatgccgataagcagtcagctgttgccagtggcactggc
tatgtgtcggagtatcatcgttttggatggttgctgtttttggcccttcgtgtacacgta
ttcagccgatttaaggacctgttgacttgcgcaaatggattggttgccattttggcaatt
ttaattattcatgttcctgtttgcttcagaaaattcagcatccatgattcaacacacttt
gcgaagaaaggcgataaaggtgtggacctgcttgcatccctttgcaacatttatgacacc
tcagaagatgagttgagaaatacaatggaaatggctaatgctttaatagcagacattctg
aagaagaagccctgttcagcatctgagtgtaaaaatgaaaatctagagaatatggatcca
gatggtttgacctactttgaaggtcttatggaggagccatcattgtcatccagtttagat
attctagaaaaagattatgatgatgcaattcggagtaagggtgaacttgatgagagagtc
ttcatcaacgaagaagatagcttacttggttcaaggagcttttctggaggatccatgaat
ttatctggtgtgaagaggaaagttgattccatagcctccccaacaaagacaattacaagt
ccactctctccccatcactctcctgcatctcatgttaatggtggtgctaattcaaagatg
gtagctacccctgtgagcactgcaatgacaacggcaaagtggcttcggacatttatttct
ccactcccatcgaaaccctcaactgagctggagggattcctggcatcgtgtgatagggat
gttaccaatgatgtgatacgcagggcacaagtaatattggaggctatatttccaagtatt
tctttgggagaacgatgtgtaactggtagcctgcaaggtgctaacctcatggacaacatc
tgggcagaacaacggagattggaagcactcaaactttattatagagttttggaggcaatg
tgtagggcagaggctcaaatactgcatgcaacgaatttgacctctttattaacaaatgag
cggttccatagatgcatgctagcctgctctgcagagttagtcctggcaacacataagact
gtcacaatgttgtttccagcagtattagagaggacaggtattacagcttttgatcttagc
aaggtgatagagagcttcattagacatgaggaatctctcccaagagaattaaggcgacat
ttgaattcattggaagaacggcttttggagagcatggtatgggaaaagggttcctcgatg
tataattctttgactgttgcaagaccagctctctcagcagaaataaatcgtcttatgtta
ttagcagaacctatgccatctttggatgaaattgccatgcaaattaacttctcatgtgga
gggctgcctccagtaccttctttacagaagcatgagaattcaccaggtcagaatggagat
atcaggtctccaaagagactctgcacggattatagaagtgtattactggagcggaattcc
tttacatcgcctgtgaaagatcgtcttctggcctcaagcaaccttaagtcaaagctgcca
ccgcctcctttacagtctgcatttgccagtccaactcggccaaatccaggaggtggaggg
gaaacatgtgcagaaactggaattagtattttctttagcaagatagtcaagctggcggct
gtcagaatcaatggtatggttgaaaggatgcaactgtctcagcagatcagagagaatgtt
tatcgtctctttcaacaaatcctcgttcagcggacatctctcttttttaaccgccatatc
gaccagattattctttgttgtttttatggagttgcaaagatttctcaacttagtctgaca
tttagggaaatcatacacaactatagaaagcaaccacaatgtaaatccctagtttttcga
agtgtgtatgttgattggcctccagcacgccgcaatgggaggccagcacaggaacacgtc
gatgtcattacattttacaatgaaatattcattccttctgtgaaatctctgcttgttgag
ctaggatctgctggtccaacaaccacaagagctaacgtagttcctgaagcaaataataac
aatgatgctcaatgtccaggatcacctaaagtgtccacttttccaactctccctgatatg
tctccaaagaaagtatctgcagcacacaatgtttatgtctctccattgcgatcatctaag
atggatgctttgatctcgcatagctcaaaaagctattatgcttgtgttggggagagcacc
catgcgtatcaaagcccttcaaaagatctcactgccattaacaaccgcttgaatggtacg
cgcaagctgagaggcattctcaacttcgacaatgtcgatgtggggttggtcagtgattct
atggtggccaacagcctctaccttcaaaatcaaaatgggtcattagaagcaccagtgaaa
actgagcaacctgacttataa
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integrated database retrieval system