Prunus mume (Japanese apricot): 103330829
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Entry
103330829 CDS
T03196
Name
(RefSeq) beta-galactosidase-like isoform X1
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00052
Galactose metabolism
pmum00511
Other glycan degradation
pmum00600
Sphingolipid metabolism
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
103330829
09103 Lipid metabolism
00600 Sphingolipid metabolism
103330829
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
103330829
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
103330829
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
BetaGal_ABD2
CRISPR_Cas6_N
Motif
Other DBs
NCBI-GeneID:
103330829
NCBI-ProteinID:
XP_008231663
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Position
LG5:3917944..3929895
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AA seq
1109 aa
AA seq
DB search
MASSLPVELVSLLENGHHVWEDQSLIKWRKRDAHVPLRCHDSIEGSLKYWYERNKVNFLV
SNSAVWDDDAVPGALDSAALWVKDLPFVKSLSGYWKFFLASSPRNVPVNFYDTAFQDSEW
ETLPVPSNWQMHGFDRPIYTNVVYPFPLDPPSVPVDNPTGCYRTYFHIPKEWKGRRILLH
FEAVDSAFCAWLNGVPIGYSQDSRLTAEFEITDYCYPSDMDKKNVLAVQVFRWSDGSYLE
DQDHWWLSGIHRDVLLLSKPQVFIADYFFKSTLAEDFSYADIQVEVKIDNSRETSKDSVL
ANYVIEAALFDTACWYSIDRYADLHLSNVASIKLNLSSSTSLGFHGYWLVGRLDMPRLWS
AEQPSLYTLAVTLKDASGNLLDCESCLVGIRQVSKAPKQLLVNGHPIIIRGVNRHEHHPR
LGKTNIESCMVKDLVLMKQYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIGTHGFDL
SGHVKHPTLEPSWATAMMDRVIGMVERDKNHACIISWSLGNEAGYGPNHSALAGWVRGKD
PSRLVHYEGGGSRTSSTDIVCPMYMRVWDMSKISRDPDETRPLILCEDSPAMGNSNGNLH
EYWEVIDSTFGLQGGFIWDWVDQALLKDNADGSKRWAYGGDFGDVPNDLNFCLNGLTWPD
RTPHPALHEVKYVYQPIKVSFSKETLRITNTHFYKTTQGLEFSWDVHGDGCKLGSGILPL
PLIEPQKSYDIKWRSALWYPLWTSSSAEEYFLTITAKLLRSTRWVEAGHVISSTQVQLPS
KREIVPHVIKTEDAVFVSETIGDKIRVSRHSFWEIIFSVQTGTVDSWTVEGVPLMTKGIF
PCFWRAPTDNDKGGGASSYFSLWKAAHINNLHYITQSCSIQNKTDHLVKIAVAFLGVPKE
EGAKRKKIKIEVDVIYTIYGSGDVVVECNVRPSSNLRLLPRVGVEFHLDKSMDQIKWYGR
GPFECYPDRKAAAHVAVYEQKVDDMHVPYVVPGECSGRADVRWVTFQNKDGFGIYASVYG
SSMPMQLNASYYTTAELDRATHNEDLIKGDDTEVHLDHKHMGLAGDDSWSPCVQFEYLVH
ADPYSFSIRLCPITPATSGQVMYKTQLQN
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctttaccggttgaactcgtttctctcttagagaatggacatcatgtgtgg
gaggaccaatctctcatcaagtggaggaagagagatgcacatgtccctttacgttgccat
gattcaattgaaggatctcttaaatactggtatgagcgcaacaaagtgaattttctggta
tccaactctgctgtttgggatgatgatgctgttcctggagctcttgatagcgcggccctt
tgggtcaaggacttgccttttgtgaagtctttgtcaggctattggaaattcttcttggct
tccagtcctagaaatgttcctgtaaatttttatgacactgcatttcaggattctgagtgg
gaaaccttgccagttccttcaaactggcagatgcatggatttgatcggcctatttataca
aacgttgtttatccatttccacttgatccaccttctgttcctgtggacaaccctactggc
tgctataggacatactttcacattcctaaagaatggaagggtcgcaggattttgttgcat
tttgaagctgttgattctgcattctgtgcatggctaaatggggtcccgataggatatagt
caggacagtagacttactgctgaatttgaaatcactgattattgttatccatctgatatg
gacaagaaaaatgtactagctgttcaagtattcagatggagtgatggctcctaccttgaa
gatcaagatcattggtggttatctggcattcatcgtgatgtgcttcttctttccaagcca
caggtattcattgcagactactttttcaaatcaactctggctgaggatttttcttatgca
gacatacaggttgaagtgaaaatagataactccagagaaacatctaaagatagcgtcctt
gcaaactatgttatagaagctgcattatttgacactgcgtgctggtacagcattgataga
tatgctgacctgcacttgtctaatgtggctagtataaagcttaatctctcatccagcacg
agtctggggtttcatggttattggctggtagggagactggacatgccgaggctttggtct
gcagagcaaccaagcctgtacactcttgctgttacattgaaagatgcatctggcaacctt
ctggactgtgaatcatgcctagtaggcatacggcaagtatcaaaagcccccaaacagctg
cttgttaatgggcatccaataataataaggggtgtgaacaggcatgagcatcatccacgt
ctggggaagacaaacatagaatcctgcatggttaaggatttggttttaatgaagcaatac
aatatcaatgctgtgagaaacagtcattatccccaacatcctcgttggtacgagctctgt
gatttgtttggcatgtacatgatagatgaagccaatattggaacccatggttttgatctt
tctgggcatgtgaagcatcctactttggaacccagctgggctactgcaatgatggaccgt
gtgataggcatggttgagagagacaaaaatcatgcttgcattatctcttggtccttaggg
aatgaagctggatatggacctaatcattctgctttagctggctgggttcgtggaaaggat
ccctcacggctggtacattacgaagggggtggatccagaacctcatccacggatattgta
tgtcccatgtatatgcgggtctgggacatgtcgaagatttcgagagatccagatgaaaca
cgccctttgatattgtgcgaggattcacctgcaatgggaaacagcaatgggaatttacat
gaatattgggaagtaattgatagcacatttggtcttcaaggaggctttatctgggattgg
gttgatcaggccctattgaaggataatgcagatggtagtaagcgttgggcatatgggggt
gactttggtgatgttcctaatgatttaaacttctgtttgaatggccttacatggccagat
cgaactcctcatccagcactgcatgaagtcaagtatgtgtaccaaccaatcaaggtttca
tttagcaaagaaacactaaggataacaaatacccacttttataaaacaacacaaggattg
gagttcagctgggatgttcatggggatggatgcaaacttggatccggtattctacctttg
ccgttgattgaacctcagaagagttatgatattaagtggcggtccgctctgtggtatccg
ctatggacttcatcatctgcagaggagtattttttaacaataacagctaagcttttgcgt
tcaacacgctgggttgaagctggtcatgttatctcatctacccaagtccagttgccttcc
aaaagagaaattgttcctcacgtcatcaagactgaagatgctgtgttcgtcagtgaaact
attggggataaaattagagtcagccgacatagtttttgggagatcatatttagtgttcaa
acgggaacagttgacagctggacggtcgaaggagttcctttgatgacaaaaggcatattt
ccatgcttctggcgagcaccaacagataatgacaaaggaggaggtgccagtagttatttc
tccttatggaaagctgctcatattaataaccttcattatattacccaaagctgttctata
cagaataagacggaccatcttgtgaaaatagctgtggcttttcttggtgttccaaaggag
gagggtgctaagaggaaaaagataaaaattgaagttgatgtgatttacacaatttacggt
tcaggagacgttgttgttgaatgtaatgtaagaccaagttcgaaccttcgacttctgcca
cgtgtgggagttgagttccatttggataagtcaatggatcagattaagtggtatggaaga
ggaccatttgaatgttatccagacagaaaagcagctgctcatgttgcggtctatgagcag
aaagtggatgacatgcatgtcccttatgtagttcctggggaatgttcaggtagggcagat
gttagatgggtgacattccaaaacaaggatggtttcggaatatatgcatcagtgtatggc
agctctatgcctatgcaactaaatgcaagttactacaccacagctgagcttgatcgggca
acgcataatgaagatcttatcaaaggagatgacactgaggttcatcttgatcacaagcac
atgggcctggctggggatgatagttggtcgccctgcgtccagttcgagtatctggttcat
gctgatccatactcattttcaattaggctgtgcccgataacccctgcaacctctggccaa
gtcatgtacaaaactcaacttcaaaactag
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